Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2891 ATGGATTTCCAAGTAGTGGTTCTCGCCGGTGGCGTTTCCAAAAAACTCCTCCCCCTCGTTTCGCATGAGCTTCCCAACGCTTTACTTCCGGTCGCTAACCGTCCCGTTCTCTCTTACGTTGTGGAGCTTTTGGAGCTTAGCAATCTTAAAGATCTTATCGTCGTTGTTGAAGGTAAAGATACTGCTCTTAACGTTGGTGCTTGGATTTCTGGAGCTTATGCTGATCGCCTCCATGTCGAGGTTGCTGCCGTTCCTGAGGATGTGGGAACAGCTGGTGCAATTCGAGCAATTGCACGCCACCTATACGCAAAAGATATTCTGATTGTTAGCGGTGATCTTGTTTCTGATGTGCCGATTGGCGCTGTTGCTGCTACTCATCGACGACACGATGCAGTTGTCACTGCTTTGCTTTGTAATACTCCTGTAAGTGGACCTTTGGAGTCAGTGTCCTCTGGTGGGAAAGACAAAGCCAAGAAACCTGGCCGCTATGATTTGATAGGGCTGGACCCCACAAAACAGTTTTTACTTCACATTGCAACTGGAGCTGAAGTTGAAAAAGATCTTCGGATTCAGAAGAGCATACTTCGTTCTGTTGGCCAGGTAGAAATAAGAGCTGATCTAATGGATGCCCACTTGTATGCGTTCAAAAGATCAGTTCTACTAGAAGTTCTAGATCAGAATGGTGAATTTCATAGCTTAAAGCATGATGTATTGCCATATCTTGTCCGCAGTCAACTGAAATCGGAAGTATTATTAAATGGTACGCCACAAGCAGAAGAAAATGGAACTGAGAAGGTTATTTCTCAAAGCAATCAACAAATGCTATCTCAAATACTTGCTAATGCATCTGAGCCCACCTTTCATTTACGACATGAACTTAGTACTAATGGTTCTGATTCTGTTCGAAGAACCCATAAATGTTGTGTCTATATTGCTGGAAGCAACAAATATTGTGCTCGCCTGAATTCTTTACAAGCATACAATGATATAAACCGGGATGTGATAGGCGAAGCTAGTCATTTGTCAGGGTATTCATTCTCTTCTCATAACAACATCATCGATCCTACCGCAGAGCTTGGAGCAAAAACAACAGTAGGGCCGCATTGTATGCTGGGGGAAGGTTCACAGATGGGTGACAAATGCAGTGTCAAACGGTCTGTCATTGGCCGCCACTGTAGGATAGGTGCCAATGTTAAGGTTGTTAATTCCGTAGTTATGAATCATGTTACTATTGGTGACGGCTGTTCAATACAAGGTTCTGTCATCTGCAGCAACGTACAGCTCCAAGAACGTGCCACACTAAAAGACTGCCAAGTCGGAGCAGGTTACATGGTCACTGCCGGTAGTGACTGCAAAGGGGAGGTATTGACTAAGAAATGA 1380 0.4442 MDFQVVVLAGGVSKKLLPLVSHELPNALLPVANRPVLSYVVELLELSNLKDLIVVVEGKDTALNVGAWISGAYADRLHVEVAAVPEDVGTAGAIRAIARHLYAKDILIVSGDLVSDVPIGAVAATHRRHDAVVTALLCNTPVSGPLESVSSGGKDKAKKPGRYDLIGLDPTKQFLLHIATGAEVEKDLRIQKSILRSVGQVEIRADLMDAHLYAFKRSVLLEVLDQNGEFHSLKHDVLPYLVRSQLKSEVLLNGTPQAEENGTEKVISQSNQQMLSQILANASEPTFHLRHELSTNGSDSVRRTHKCCVYIAGSNKYCARLNSLQAYNDINRDVIGEASHLSGYSFSSHNNIIDPTAELGAKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGANVKVVNSVVMNHVTIGDGCSIQGSVICSNVQLQERATLKDCQVGAGYMVTAGSDCKGEVLTKK* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2891 459 SUPERFAMILY Nucleotide-diphospho-sugar transferases 4 425 IPR029044 -
Mtr8g2891 459 CDD LbH_eIF2B_gamma_C 370 449 - -
Mtr8g2891 459 Gene3D Hexapeptide repeat proteins 350 452 - -
Mtr8g2891 459 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 346 IPR029044 -
Mtr8g2891 459 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 1 458 - -
Mtr8g2891 459 Pfam Nucleotidyl transferase 6 143 IPR005835 GO:0009058|GO:0016779
Mtr8g2891 459 CDD eIF-2B_gamma_N 3 220 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2891 314 435 Eukaryotic Initiation Factors Gene Family AT4G18300 28.986 6.66e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2891 K03241 - gmx:100783346 787.719