Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2868 ATGAATAGTAATATAACAAGAGAACCAGGTTTATATGTCTCAGTTACACAAATGGATGTTAGTGCTACAGCCTTCAAAGTTTGTTCTGTTGCTCCACCAAATATTGTTTCAGATGGAATATGGGGTGGCCCAGATAGTAGAAAGAATCCAATGAAGTCTGCACTTCCTGTGTTTGAGATGCAGCTTCTTGTGATTTTTACTATCACACAAATCTGCAATTTCTTCCTAAAACGTTTGCATTTCCCTGCATTTATTGCACCAATGATAGTTGGCCTAATTCTAGGACCTTCAATTCAAAATGCGGAATTTGACAAATACAAGAAGTTGTTGTTTCCATATGGAAGTCAAGACATACTTGCAACAATATCATTAATTGGTTATGGACTTTACATCTTTACCACTGCTGTGCAAATGGATTTGAGCATGGTAATGAGAACAGGACACAAGGTTTGGACCATTACAATCATGGGATTTGTCGTGCCTATACTGTTTAGTATTGTGCCTAAATTCTTGGTGTTAGAAGTAGTAAATGATTTTCGATTCGGAGATATGACTAAAGAACAGTTGGAAGCAGATATTTTTAAGGTGGCGATAATACATAGCTCGGTTGCATTCGCAGTCACTGCTACGCTCCTCAACGAACTTAAAATCCTTAACTCCGAACTCGGAAGATTGGCATTATCATCAGCAATGGTGACTTCCGTCCTAGGACTGTCTCTTCAATGTATTTGGAATGTCGTAGATCAAAAAGACGGACACAAGATGATAATCCATGGGATGTTATTGGTTGCTTTAGTTATCTTTGCTCCATTGATTTTTCGGCCATTAATGTTTTGGATCATCAGACATACTAAAGAAGGAAGACCTGTGGATGATGGTTACATCTATGGTATCATTGTAATGGTATTAGGTTTAGGTTGGTTTGCGGGTTACATAAACCAAGAGTTTGCATTAGGTGCATATGTTTTGGGGTTAGCTGTGCCAGAAGGACCTCCATTAGGATCTGCATTGGTTAGGAAGCTTGAATTCTTTGGGACAAGTTTGCTTCTGCCAATATTTATGACTTGTTGTGTGATGAAGGCAGATTTTACTTTGCCATATACATTAAAGGCAGCTATTGATTTTGGTGGCATCATTTGGTTTACACACACTGTCAAAGTAATAGCAATCCTTATACCTTCCCTCATTTGCAAAATCCCCTTCAAAGATGCCTTGACTCTTGCCCTCATTTTGAATGCCAAAGGAGAAGTGGATCTTGCCAAACTTTCATTTGGATATGATGACCAGGTTTTTCCTGGCCAAGTTTATTCAGTGAATGTAATCAACATAATGGTCATAGCTTGCATAATAAAATGGTCAGTGAAGATATTGTATGATCCATCAAGAAAATATGCCGGCTACCAGAAACGGAACATCGTGAGTTTAAAACCCGACGCAGAACTCAGACTAGTTGCTTGCATTCACAAACAATACAACATATCAGCTATAACAGACGCCCTTGACGTTTTTTCTCCAACAACAGAAAAACCTATCATTGTGGATGCATTACATCTTATTGAGCTAGTTGGAATGTCATCCCCAATTTTCATCTCCCATCGTCTTCAAAAAATGGTTTCAGGTTCTCATAGGTCTTACTCAGATGATGTCATTCTTGCTTTGGATCTCTATGAACATGATAACTATGGTGGAGTAACCGCACACGCTTACACCGCCATATCTCCACCGACCCTTATGTATGAAGATGTTTGCCAACTTGCATTGGACAAAGTTACATCCATCATAATTCTTCCATTCCATAGAAGATGGACTATTGATGGTGGCATTGAATCTGATGACAAGAACGTAAGGTCCTTAAACTGCAAGGTACTAGAAATAGCTCCATGCTCAATAGGAATCCTCGTGAATCGATCTTCCTTAAAAAACAATTCATTCATTAAGCTAGCCATGATTTATCTTGGTGGAAGAGACGACAGAGAAGCTTTGTGCTTAGCTAAAAGAGCGACTAGCAACCCGGGGATCAACTTGGTTGTGTACCACCTTACATTTGAGGATCACATTCACATGGAAAACTTGGAGTATATACTTGACAATGAGGCACTCGAAGAAGTAAAGAAACTACCACATTATGGCTCGAAAAATGTTTGTTATCAAAAATTGATTGTAAATGATAGTCCAGGGACATCAACTATTCTTTGCGATATAGCGAATGAACATGACTTTTTTATTGTTGGGAGAACACATGACTCAGACTTGCCTCAGATAGAAGGACTAGCAAAATGGACTGAATTTTCAGAGTTAGGTGTCATTGGTGATTTGCTTGCTTCACCAGATCTTGGGAGCAGAGCTGGTGTTTTGGTAGTGCAACAACAAGCCAAAGACAAATAA 2385 0.3891 MNSNITREPGLYVSVTQMDVSATAFKVCSVAPPNIVSDGIWGGPDSRKNPMKSALPVFEMQLLVIFTITQICNFFLKRLHFPAFIAPMIVGLILGPSIQNAEFDKYKKLLFPYGSQDILATISLIGYGLYIFTTAVQMDLSMVMRTGHKVWTITIMGFVVPILFSIVPKFLVLEVVNDFRFGDMTKEQLEADIFKVAIIHSSVAFAVTATLLNELKILNSELGRLALSSAMVTSVLGLSLQCIWNVVDQKDGHKMIIHGMLLVALVIFAPLIFRPLMFWIIRHTKEGRPVDDGYIYGIIVMVLGLGWFAGYINQEFALGAYVLGLAVPEGPPLGSALVRKLEFFGTSLLLPIFMTCCVMKADFTLPYTLKAAIDFGGIIWFTHTVKVIAILIPSLICKIPFKDALTLALILNAKGEVDLAKLSFGYDDQVFPGQVYSVNVINIMVIACIIKWSVKILYDPSRKYAGYQKRNIVSLKPDAELRLVACIHKQYNISAITDALDVFSPTTEKPIIVDALHLIELVGMSSPIFISHRLQKMVSGSHRSYSDDVILALDLYEHDNYGGVTAHAYTAISPPTLMYEDVCQLALDKVTSIIILPFHRRWTIDGGIESDDKNVRSLNCKVLEIAPCSIGILVNRSSLKNNSFIKLAMIYLGGRDDREALCLAKRATSNPGINLVVYHLTFEDHIHMENLEYILDNEALEEVKKLPHYGSKNVCYQKLIVNDSPGTSTILCDIANEHDFFIVGRTHDSDLPQIEGLAKWTEFSELGVIGDLLASPDLGSRAGVLVVQQQAKDK* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2868 794 PANTHER CATION/H + ANTIPORTER 16 793 - -
Mtr8g2868 794 Gene3D - 58 465 IPR038770 -
Mtr8g2868 794 Pfam Sodium/hydrogen exchanger family 64 448 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr8g2868 794 PANTHER EXCHANGER, PUTATIVE-RELATED 16 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2868 Mtr-Chr8 39374888 39378010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2868 19 787 Antiporter Super Family AT3G44900 35.564 2.98e-151 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2868 - - mtr:MTR_8g085260 1578.53