Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2862 ATGCGTTGTTACGGCTTAACAATCCCTGGAAGCGATCATCGCTTCATCACACCAACACTACCTCCTCCTTCACTATCCTTCCGACCCACCACCATACCCATGACCCGAATTTCATTCGGGTCATCCTTCCCAAAGCTCAGAGCCACCTTCAACGACGGGGTTGTGGCGGAGGAACGGAGCTTCTACGATCTTCTGGGCATACCAGAATCCGGTTCATTGATGGATATCAAAAGCGCTTATAAACAACTTGCAAGAAAGTATCACCCGGATGTTTCACCACCGGATCGGGTCGAAGAGTATACCAAGAGGTTTATTCAGGTGCAGGAGGCGTATGAAACTTTGTCTGATCCATCAAGAAGGATTATGTATGATAGAGATATGGCTAGAGGGATTCATCTTGCTTTCAATGCTCGTAAATGCTATAATCATTCTGATCAGGTGAGTGAACAAAAGGGTGAATGGAAGTCTCGTTGGCAATCTCAACTCGATGGCCTGAAGAGAAGAAGTGATAGCAAGGTCATGGATGGTGCTGAGAATACGTCATGGGCGGCTCGAATACGCCAGCAGAGGGGGGGATTGTGA 582 0.4777 MRCYGLTIPGSDHRFITPTLPPPSLSFRPTTIPMTRISFGSSFPKLRATFNDGVVAEERSFYDLLGIPESGSLMDIKSAYKQLARKYHPDVSPPDRVEEYTKRFIQVQEAYETLSDPSRRIMYDRDMARGIHLAFNARKCYNHSDQVSEQKGEWKSRWQSQLDGLKRRSDSKVMDGAENTSWAARIRQQRGGL* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2862 193 ProSitePatterns Nt-dnaJ domain signature. 104 123 IPR018253 -
Mtr8g2862 193 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 18 190 - -
Mtr8g2862 193 PANTHER CHAPERONE PROTEIN DNAJ 20, CHLOROPLASTIC 18 190 - -
Mtr8g2862 193 ProSiteProfiles dnaJ domain profile. 60 127 IPR001623 -
Mtr8g2862 193 PRINTS DnaJ domain signature 62 80 IPR001623 -
Mtr8g2862 193 PRINTS DnaJ domain signature 80 95 IPR001623 -
Mtr8g2862 193 PRINTS DnaJ domain signature 99 119 IPR001623 -
Mtr8g2862 193 SUPERFAMILY Chaperone J-domain 56 131 IPR036869 -
Mtr8g2862 193 Gene3D DnaJ domain 47 160 IPR036869 -
Mtr8g2862 193 CDD DnaJ 61 116 IPR001623 -
Mtr8g2862 193 Pfam DnaJ domain 61 124 IPR001623 -
Mtr8g2862 193 SMART dnaj_3 59 119 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2862 Mtr-Chr8 39296157 39299681 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2862 56 124 C2H2 Transcription Factor Family AT1G74250 40.278 1.39e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2862 - - cam:101492872 292.737