Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2835 ATGCATCACCAAGATCAAACCATAACTCACACCCCAGGGAACGAGAATCATGGAGTTTATGTGTGTCACAAATGTGGTTGGCCTTTTCCAAATCCACATCCCAGTGCTAAACATAGACGTGCTCACAAGAAGATCTGTGGAACCATTGAAGGTTACAAAGAGGAACCAACCAATTTCAATGGTTCAGATGTTGATTACAAAACACCAGGTTCAAACAATGGTGGAATTGAAAGGAAATTTAGTAGATCAGAAAGTGAGGTTTATTCAGATGCTGTTGATGATTTTCCGGATACTGGACTAAGTCAAGGAGTTAAACACAATTTGCAACAAGAACATACTTTGAACTCAGCTGCGGATGTGAGTCCACTTATTGCTAGCTCAAGCAATGACTGCCAAATTAAAAATCCAAAAATTATGCAAAGTGAAAGTTTTGAAGTGGGAAATATAGGTGGGACGCAAGGTCAATTGTCAGGCTCTACTGTGGATCCATTAACAAGCTCAATTGCAGATTCAAAGAATGAAGAATCGAGTATTGTGCATGGTGATGGTTTTTCTGGTTTGTCAAGTGACTCAAGTCTCGGCATAGCTGAAGCCGTGCCCAATTTATTGCCAGAAAAAAATATTTATGCTGGTGAAAATGTGACAGATTGTAGTTTGGTGTGTGATGAAAAGGAGCTTAATTTGAAAGGAACCGATGAGGTAAAATCAGAAAAAGACAGGGTTGAAATCATGGAGTCAACTGATAACATTGTAGGTGAAACATATGAAGGAACTCCTAAAATAGTAGTTAACGAAGCAATTTCCCTGGATCATGACATGGGCAATGAAGCTGTTAATCCAAAGGAAAAGAAGGGACCCGGGTCCCTGTCTTTGCTGCCCCAGTATGAATTTCCTCAAGAAGTAAACTCGTCAATAATCACGAATGAGGCTCAGGTAGAATCTGCACATGCAATACATTCTACTAGTAATGAAGTCGAGGTTTTGCCAGAAAAGGAAGACGTGAATGTTAATATTGATCCACTTCCTGTGCATGATGATAAATTTGATGCAGCTTATCCTCAGAGCGTGTCATTGAAACATGAGGAACATGTTACCGAGGAAAATAATTTTCATTTCAACACAAGCCAGTTGAGTGAAAGAAATGGTGTACTCTCTTCAGAGATGCATGTTATGGATAATGACACGAAGACTGAAAATATACATGCTGAAGATTGCTCTGAAGTTTCTTTGGTTGAGCTCACAACTGAAACTTATCAAATATCGCATGAAATCGGAGTGTCTACGAAAACTGAGATGGATGAGAATGATTTTCCAGAAGAGCATGAGCCTGATGAAATTCATGAAAATTCTCAACCTGAAAGTAGTTTAATGGTCTCAGCAAATGAATTTCAGAGGGAGGCATCCTTTCGGTCTGCGACTGATGAAACATTTAGCATCATCAGTAATGACACAACTGAAATAAACGATGCATCTGTAGTTGGAAAGGTTGTAGGAGAAAATGTGGTAAATGACAGTGAAGTTATAGTGAAAGATTTTCAACCTCGTAGTGACCACTTGCAATCAGAAGTTGAGCAATCAAGTGATTTATTTAGGAATAATAGTGATGATGCTGGTGAAAATGGTAAAATTGAAGATTTAATCAATAGCAATATCAAGTTATATGAAGAGAATAAGAAACCGACTGGTATTGCTGCTGACTTGCATGAAGAACAGGATGAACAACTATCAGTGAAGGCTGCTGAAGACTTTTCTCGCAAGCATACATCACATTCTTCGACAAATGCTGTGCTTTCTGTTGAACCGGATTCCGCCGTTGAAGATGATTCAATTGGAGAGCCTGTTCAAGATCAAAGCCATGATAACTTGGTTAAACTTGGTTCATCTGGAATTGATACTTCTGCTGACTCACATGAAGCATGGGATGCACAACTATTAGTGAAGGCTACAGAAGACCTTGCCAGCAAGTATGCATCACATTCTTCTATAAATTCCGGGGCTTCTGCTGAACATGATTCTGCTGTTGAAGATAATTCAGGTGGCAGAGAAGTGTCTAGAGTTACTGCTGTGCCACTGCCGGTTGATGATCAAAGCAATAATAACTTGACTAAATTAACTCCACCCAGAACTGATGTTTCAGTTGACTCTGGTAGCCGGCGTGACAGTTTGGAAGGGAACTGGGGTTCTGGTTCAGTTATCTCGATGATATCCGACGCACCAGCTGTTACCGATGTAGAAACTTTACCATCAACCGGTTCGCTGGCATCGACAGAAGCAGGCAAATCAGACTTGAACGTCCGACAAGCTGCACCTGCTGAGAGACAGCTGTCTGGAAAATCAGAAACATTTGAGCTGCCATCTTTCACAACATTGGTTGAGCCTAGCCACGTGGCTAGTCCTAAAGGCACCACTTCTGAAACCACGAACCCACAACAGTCAAATTCCACCTCACCAGCTGGTTGGTTCCCAACTTTAAATCAGGTTATCAATGAGTCTGAAGCGAAAAAGAAGAATGAAGAAAAAATCACCAAGATAACAAACCGGAGCAGAAGTAAAGAGCACACACCTCTCAAGAGTCTTTTGGGTGAGGCTACTCCTAGAAACAAGCCGAAATCACCAAAAATAGAAGAAAATAATGGTTCTGGATTGACAACTGTTAACTCAATTCTTGGTCCTGAGTCCCCTTCAGAGACTCAAGTGGTGAAAGAAAAGGCTGCAAATGAATGGAACTCTCCAGCAAGATATCCTGCAAATATCAAGAGGGAAAAAAAGAAATTGAAGAGCAGACCATTTTGGATACAGTTGGTTTGTTGCACAACAGTGGATCCTCAGCGAAGGTAG 2838 0.4073 MHHQDQTITHTPGNENHGVYVCHKCGWPFPNPHPSAKHRRAHKKICGTIEGYKEEPTNFNGSDVDYKTPGSNNGGIERKFSRSESEVYSDAVDDFPDTGLSQGVKHNLQQEHTLNSAADVSPLIASSSNDCQIKNPKIMQSESFEVGNIGGTQGQLSGSTVDPLTSSIADSKNEESSIVHGDGFSGLSSDSSLGIAEAVPNLLPEKNIYAGENVTDCSLVCDEKELNLKGTDEVKSEKDRVEIMESTDNIVGETYEGTPKIVVNEAISLDHDMGNEAVNPKEKKGPGSLSLLPQYEFPQEVNSSIITNEAQVESAHAIHSTSNEVEVLPEKEDVNVNIDPLPVHDDKFDAAYPQSVSLKHEEHVTEENNFHFNTSQLSERNGVLSSEMHVMDNDTKTENIHAEDCSEVSLVELTTETYQISHEIGVSTKTEMDENDFPEEHEPDEIHENSQPESSLMVSANEFQREASFRSATDETFSIISNDTTEINDASVVGKVVGENVVNDSEVIVKDFQPRSDHLQSEVEQSSDLFRNNSDDAGENGKIEDLINSNIKLYEENKKPTGIAADLHEEQDEQLSVKAAEDFSRKHTSHSSTNAVLSVEPDSAVEDDSIGEPVQDQSHDNLVKLGSSGIDTSADSHEAWDAQLLVKATEDLASKYASHSSINSGASAEHDSAVEDNSGGREVSRVTAVPLPVDDQSNNNLTKLTPPRTDVSVDSGSRRDSLEGNWGSGSVISMISDAPAVTDVETLPSTGSLASTEAGKSDLNVRQAAPAERQLSGKSETFELPSFTTLVEPSHVASPKGTTSETTNPQQSNSTSPAGWFPTLNQVINESEAKKKNEEKITKITNRSRSKEHTPLKSLLGEATPRNKPKSPKIEENNGSGLTTVNSILGPESPSETQVVKEKAANEWNSPARYPANIKREKKKLKSRPFWIQLVCCTTVDPQRR* 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2835 945 MobiDBLite consensus disorder prediction 831 856 - -
Mtr8g2835 945 MobiDBLite consensus disorder prediction 789 830 - -
Mtr8g2835 945 MobiDBLite consensus disorder prediction 429 454 - -
Mtr8g2835 945 MobiDBLite consensus disorder prediction 429 449 - -
Mtr8g2835 945 MobiDBLite consensus disorder prediction 660 730 - -
Mtr8g2835 945 MobiDBLite consensus disorder prediction 874 904 - -
Mtr8g2835 945 MobiDBLite consensus disorder prediction 581 619 - -
Mtr8g2835 945 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 940 - -
Mtr8g2835 945 ProSiteProfiles Zinc finger C2H2 type domain profile. 20 42 IPR013087 -
Mtr8g2835 945 MobiDBLite consensus disorder prediction 516 542 - -
Mtr8g2835 945 MobiDBLite consensus disorder prediction 789 906 - -
Mtr8g2835 945 ProSitePatterns Zinc finger C2H2 type domain signature. 22 42 IPR013087 -
Mtr8g2835 945 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 940 - -
Mtr8g2835 945 MobiDBLite consensus disorder prediction 691 730 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr8g2835 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2835 - - mtr:MTR_8g081010 1848.94