Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2834 ATGTTTGTTAAATTGAAAAGCCTAGTCCTACTACACAAACCTTATGCAATGCTATCCCTCAAGTTGTTACGCTCTCTTCCTTTAAATTCTAACTCACTTCATTCTTTTCTGTGTTCATTTTCTTCTTTATCAACCCCAATTAACCAATCTTCAAACGAAGAAACCACTTTTCTTTTTAACCTCCTTAATTCCAATTCCAAATTACATAAATCTGAATCCATCTATGTATCTAAACTTGTTTTAGGAATCACTTCCCCTGAAAAGCCCTTATCTGTAATCAACTTTTTCAAACAAATTGGATTTTCTCAAACTCAGATTCACTCCATCATTCATCAGAGAACTCAAGTACTCTTTTCAAAGGTTGATAAAACTCTTAAACCTAAAGTTGAACTCTTTCAACAATTGGGTTTTCAGGGTTCTCAATTAGGTCATTTTCTTTCTAAGAATCCAAACATTTTGATTGCTAGTTTGAACAAAACATTGGTCCCCTCTGTGGAAGTTATTAAGAAATTTGTACGGAATGAGAAGGATCTTAATCGTGTTTTGTACAAATGTGGCTGGATACTCCCGCAGTACCGATTATTTGTTGCCAACATTGCTTTCTTAGAGAGTTGTGGCATTGTTGGGAATCAGGTTTTGATTATACTCAAATGTTACTCAAGGATTTTGATTGAACCACAATCTCGTATTAGAAACTATATTTCCCAAGCTGAAGACCTGGGTTTCCCTCAAAATTCAAGAATGTTGGTTCATGCACTTCATACGTTATATTGTTTGAGCCATAAAACATTTGAAAAAAAGCTTGATTTTATTCAGCATTTTGGGTTTTCTAAAGATCAGAGCTTGCGAATGTTCAAACATGTTCCAGCTTTGCTTAGGTCATCGGAGAAGAAATTAAAGGTTGGAATTGAGTTCTTCTTACATACAGTTATGCTGCCAAAGTCAACATTGGTTAGTCAGCCTGCGATTTTGATGTATAGCATGGAGGATCGAGTGTTTCCTCGCTTTAGAGTTTATCAGCTTTTAAAATCACAAAATCTATGTCAGAAGCTTCCAAGCTTTGTTACTGTGTTATCTTTTTCTGAGGACATGTTCTTGGACAGGTTTATATCAAGGTGTAAAGAAAAAGCAGAGGCGTTAGTGATAGCTTACAAGGGGCATTGTCTAGAAATTTGCGCTATAGAACGAAAGGAAGGATATTGA 1203 0.3541 MFVKLKSLVLLHKPYAMLSLKLLRSLPLNSNSLHSFLCSFSSLSTPINQSSNEETTFLFNLLNSNSKLHKSESIYVSKLVLGITSPEKPLSVINFFKQIGFSQTQIHSIIHQRTQVLFSKVDKTLKPKVELFQQLGFQGSQLGHFLSKNPNILIASLNKTLVPSVEVIKKFVRNEKDLNRVLYKCGWILPQYRLFVANIAFLESCGIVGNQVLIILKCYSRILIEPQSRIRNYISQAEDLGFPQNSRMLVHALHTLYCLSHKTFEKKLDFIQHFGFSKDQSLRMFKHVPALLRSSEKKLKVGIEFFLHTVMLPKSTLVSQPAILMYSMEDRVFPRFRVYQLLKSQNLCQKLPSFVTVLSFSEDMFLDRFISRCKEKAEALVIAYKGHCLEICAIERKEGY* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2834 400 PANTHER EMB|CAB62602.1 45 387 - -
Mtr8g2834 400 Pfam mTERF 195 365 IPR003690 GO:0003690|GO:0006355
Mtr8g2834 400 Pfam mTERF 21 224 IPR003690 GO:0003690|GO:0006355
Mtr8g2834 400 Gene3D Transcription termination factor 3, mitochondrial 174 379 IPR038538 -
Mtr8g2834 400 PANTHER CGI-12 PROTEIN-RELATED 45 387 IPR003690 GO:0003690|GO:0006355
Mtr8g2834 400 SMART mt_12 282 313 IPR003690 GO:0003690|GO:0006355
Mtr8g2834 400 SMART mt_12 314 345 IPR003690 GO:0003690|GO:0006355
Mtr8g2834 400 SMART mt_12 247 277 IPR003690 GO:0003690|GO:0006355
Mtr8g2834 400 SMART mt_12 143 174 IPR003690 GO:0003690|GO:0006355
Mtr8g2834 400 SMART mt_12 213 243 IPR003690 GO:0003690|GO:0006355
Mtr8g2834 400 SMART mt_12 107 138 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2834 Mtr-Chr8 39023178 39026075 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr8g2834 mTERF 1.8e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2834 K15032 - zju:107425470 300.056