Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2833 ATGCTATCCCTCAAGTTGTTTCGCTCTCTTCCTTTCAATTCTAACATGCATCGTTCCTTTCTCTTTTCATTTTCAACCACTTCTTCCTTATCAACCCCGATAAACCAATCTTCCACCGAAGAAACCACTTTTCTGTTTAACCTCCTTAATTCCAATTCCAATTTACCTAAATATCAATCCATTTATATCTCAAAACGTGCTTCAGGAGCTACCTTCCCTCAAAGGCCATTGTCTGTCCTTAACTATTTCAAACAAGTTGGATTTTCTCAAGCTCAGATTCACTCCATCATTCGCCAGAGACTTCCATTACTCTTTTCAGATGTTGATAAAACTCTCAGACCTAAAGTTGAGTTCTTTCAACAATTGGGTTTTCAAGGTTCTCATTTACGTGACTTTATTTCTAAGAATCCAACCATTTTGACTGCTAGTTTGAACAAAAAATTGATTCCCTCGGTGGAAGCTATTAAGAAAATTGCACAGAATGAGAAAGATTTTATTCAAGTTTTGTCCAACTGTGGCTGGCTACTCCCAAAGTACCAATTATTTGTTGCCAACATTGCTTTCTTAGAGAGTTGTGGTGTTGTTGGGGATCAGGTTTTGTTTCTACTCAAACGAAAATCACGATTTTTCATTGTACCACAATCTCGTATTAAGAACTATGTATCGCAAGCTGTAGACTTGGGTTTCCCTCAAAATTCAAGAATGTTAGTTCATGCACTTTTTACGATACATGGTTTGAGCAATAAAACATTTAGGAGAAAGCTTGACTTAATTCAGTGTTTTGGGTTTTCTAAAGATGAGAGCCTGCAAATGTTCAAAAAGGCTCCATATTTGCTTAAGGCATCAGAAAAGAAATTAAAGGTTGGAATTGAGTTTTTCCTAAATACAGTTATGCTGCCAAAGTCAGTATTGGTTAGTCAGCCTATGGTTTTGATGTATAGCATGGAGGATCGAGTGTTTCCTCGATATAGAGTTTTTCAGCTTTTGAAATCACAAAATCTATGTAAGGAGGTTCCAAGCTTTGTTACCATGCTATGGTTATCTGAGGACAAGTTCTTGGACAGGTTTATATCAAGGTTTAAAGAAAATGCAGAGGCATTACTGATAGCTTTCAAGGGGCATCATCTAGATGCATAA 1137 0.3676 MLSLKLFRSLPFNSNMHRSFLFSFSTTSSLSTPINQSSTEETTFLFNLLNSNSNLPKYQSIYISKRASGATFPQRPLSVLNYFKQVGFSQAQIHSIIRQRLPLLFSDVDKTLRPKVEFFQQLGFQGSHLRDFISKNPTILTASLNKKLIPSVEAIKKIAQNEKDFIQVLSNCGWLLPKYQLFVANIAFLESCGVVGDQVLFLLKRKSRFFIVPQSRIKNYVSQAVDLGFPQNSRMLVHALFTIHGLSNKTFRRKLDLIQCFGFSKDESLQMFKKAPYLLKASEKKLKVGIEFFLNTVMLPKSVLVSQPMVLMYSMEDRVFPRYRVFQLLKSQNLCKEVPSFVTMLWLSEDKFLDRFISRFKENAEALLIAFKGHHLDA* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2833 378 Pfam mTERF 182 353 IPR003690 GO:0003690|GO:0006355
Mtr8g2833 378 Pfam mTERF 80 168 IPR003690 GO:0003690|GO:0006355
Mtr8g2833 378 PANTHER EMB|CAB62602.1 30 374 - -
Mtr8g2833 378 Gene3D Transcription termination factor 3, mitochondrial 161 366 IPR038538 -
Mtr8g2833 378 PANTHER CGI-12 PROTEIN-RELATED 30 374 IPR003690 GO:0003690|GO:0006355
Mtr8g2833 378 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Mtr8g2833 378 SMART mt_12 200 230 IPR003690 GO:0003690|GO:0006355
Mtr8g2833 378 SMART mt_12 301 332 IPR003690 GO:0003690|GO:0006355
Mtr8g2833 378 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Mtr8g2833 378 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2833 Mtr-Chr8 39019830 39021962 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr8g2833 mTERF 4.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2833 K15032 - vvi:100268158 326.635