Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2811 ATGTGGTTGAAATGGTGGGAGAAGATTTTAGGGAATGGTTACAAAATCAATCAACAGTACTATCAGTATATTGGGTCAAAGAGAGTGAAGAGAGAGTTATGGAGAAAGCTTTTGTTGACATGGGTATTGGGTTGGACTGTAGTGTCTTTGTGGATCTTCTGCTTTATGAGTTTACAAGCTACTGAGAAGAGGAAAGAAACTCTTGCTAGCATGTGTGATGAAAGGGCTAGGATTGTTCAGGATCAATTTAATGTTAGTATGAACCATATTCAAGCTATGTCTATTTTGATCTCAACTTTTCATCATGCTAAGAGTCCCTCAGCCATTGATCAGAGAACTTTTGCTAGCTACACAGAAAGAACAGCTTTTGAGAGGCCTCTAACAAGTGGTGTGGCATATGCTGTAAGAGTGCTTCATTATGAAAGGGAACAATTTGAGAAGCAGCAAGGTTGGATTATTAAGAGAATGGATACTCTAGAGCAGAATCCAGTTCATAAGAACGATTATGCTGTAGAGGAATTGGAGCCATCCCCTCTTCAGGAAGAATATGCTCCTGTCATATTTGCACAAGATACAATTTCACATGTCATTTCTGTTGATATGCTTTCTGGAAAGGAAGACCGTGATAATGTGCTGCGTGCAAGAGAATCAGGCAAAGGGGTTTTAACGGCACCCTTCAGGCTTCTCAAATCAAATCGGTTAGGTGTTATCCTTACATTTGCCGTCTACAAGAGATATCTTCCATCAAATGCAACCCCAAATGAAAGGCTTCAAGCGACTAATGGGTATCTTGGTGGGGTATTTGATGTTGAGTCATTAGTGGAGAAATTACTTGAGCAACTTGCTAGCAAGGAAAGTGTAATTGTTAATGTATATGACACTACAAATCATACTCATCCAATTGCCATGTATGGCTCAAATATATCAGGGGATGTGTTCAATCATGTCAGCACTCTTAACTTTGGTGACCCTTTCAGGAAACATGAGATGCATTGCAGGTTCAAACAGAAACCGCCTTTGCCATGGGCTGCAATATATACTTCAAGTGGCATTCTTGTTATTGCTCTCCTTGTTGGACATATTTTCTATGCCACCGTGAATCGAATTGCAAAAGTAGAAGATGATTACCATGAAATGATGGAGCTTAAAAAACGTGCGGAGGCAGCCGATGTTGCAAAATCCCAGTTTCTTGCCACTGTTTCCCATGAAATCAGAACACCAATGAATGGTGTTTTAGGGATGATGCATATGCTTATGGACACAGATTTGGATGTAACTCAACAGGAATATGTCAGAACAGCACAGGAAAGTGGAAAAGCTCTAGTGTCACTTATAAATGAGGTTTTGGATCAGGCAAAGATTGAATTTGGTAAGCTAGAGCTTGAGGCAGTGCTTTTTGACATACGTTCGATTTTGGATGATGTATTGTCACTATTTTCTGATAAGTCCCAGGGAAAAGGAGTCGAGTTGGCAGCTTATGTGTCAGATCAAGTTCCTAAACTGCTAATAGGTGATCCTGGAAGGTTTCGGCAAATAATTACTAATCTCATGGGCAACTCAATTAAGTTCACAGACAAAGGACACATTTTTGTGACTATCCATCTTGTTGAGGAGATTGTTCATTCTATAGAGGTTGACAATGAATCAAATCCAGAAAATACATTGAGCGGTTTCCCTGTTGTGAAAAGTTGCCTGAGTTGGAAAGGATTCAAGGCTTTCAGTCAAGAGGGACCACTTGGTTCTTTCTCTTCCACCTCTAGTGATCTCATCAATTTGATTGTATCTGTTGAAGATACAGGTGACGGTATTCCTAGAGAATCTCAACCTCTCATCTTCACTCCATTCATGCAAGTAGGTTCGTCGATCTCCCGAAAACATGGAGGAACTGGTATTGGACTAAGCATTAGCAAGTGTTTGGTTGGCCTCATGAATGGTGAAATTGGATTTGCAAGTGAACCAAAAACTGGTTCCACTTTCACTTTTACTGCTGTCTTTGCCAATGGGCTCCTCAGTTCCAATGAGTGTAAAATACCGCAAATCAACGACCAATCTAAACCTGCATCTTCAGAATTTGAGGGTATGAATGCATTGGTTATTGATCCAAGACCTATTAGAGCAAAAGTGTCTCAATATCACATCCAACGTCTTGGCATTCACGTTGAAAAGGTTTCAGATTTGAACCAAGGTTTGTCAACCATAAACAAAGGGAATGCAGTTATCAACATGGTATTGATTGAGCAGGAAGTTTGGTATAGAGATTCAAGCATGTCATCTCATTTTTTCGATAGCACAAGGAAAGTCAACCACGGTTTTCCTCCAAAGTTATTCATTCTTGTTAATTCTAGTAACTCTTCTAAAACTAGCAGTGTAATGTCAGATGTTGATAATCCTACTATCATTACAAAACCACTCAGGGCAAGCATGCTTGCTGCGTCACTACAGCGAGAGATGAATGTTAGGAACAAGAGAACTTTAAACAGGGACCTTCAAAATTTGTCTCTTAGCCATCTTCTTGTTGGGAGGAAAATTCTAATTGTTGATGATAATGGCGTGAATCGGGCAGTAGCAGCTGGTGCTTTGAAAAAGTACGGAGCAGATGTGGTTTGTGTTAGTAGTGGAAAAGATGCTATCTCTTCGCTGAAGCCCCCTCATCAGTTCGACGCCTGTTTCATGGATATTCAAATGCCAGAAATGGATGGTTTTGAAGCTACAGGTAGAATCAGAGAGATGGAACAGAATGTAAACAGGGAAGCATCTATAAACTGGCATGTGCCGATTTTAGCGATGACAGCGGATGTAATTCAGGCTACACATGAGAAATGCCTAAGGTGTGGAATGGATGGATATGTTTCAAAACCATTTGAAGCCGAACAACTTTATCGGGAAGTTTCTCGGTTTTTCCTGTCATCTTGA 2913 0.403 MWLKWWEKILGNGYKINQQYYQYIGSKRVKRELWRKLLLTWVLGWTVVSLWIFCFMSLQATEKRKETLASMCDERARIVQDQFNVSMNHIQAMSILISTFHHAKSPSAIDQRTFASYTERTAFERPLTSGVAYAVRVLHYEREQFEKQQGWIIKRMDTLEQNPVHKNDYAVEELEPSPLQEEYAPVIFAQDTISHVISVDMLSGKEDRDNVLRARESGKGVLTAPFRLLKSNRLGVILTFAVYKRYLPSNATPNERLQATNGYLGGVFDVESLVEKLLEQLASKESVIVNVYDTTNHTHPIAMYGSNISGDVFNHVSTLNFGDPFRKHEMHCRFKQKPPLPWAAIYTSSGILVIALLVGHIFYATVNRIAKVEDDYHEMMELKKRAEAADVAKSQFLATVSHEIRTPMNGVLGMMHMLMDTDLDVTQQEYVRTAQESGKALVSLINEVLDQAKIEFGKLELEAVLFDIRSILDDVLSLFSDKSQGKGVELAAYVSDQVPKLLIGDPGRFRQIITNLMGNSIKFTDKGHIFVTIHLVEEIVHSIEVDNESNPENTLSGFPVVKSCLSWKGFKAFSQEGPLGSFSSTSSDLINLIVSVEDTGDGIPRESQPLIFTPFMQVGSSISRKHGGTGIGLSISKCLVGLMNGEIGFASEPKTGSTFTFTAVFANGLLSSNECKIPQINDQSKPASSEFEGMNALVIDPRPIRAKVSQYHIQRLGIHVEKVSDLNQGLSTINKGNAVINMVLIEQEVWYRDSSMSSHFFDSTRKVNHGFPPKLFILVNSSNSSKTSSVMSDVDNPTIITKPLRASMLAASLQREMNVRNKRTLNRDLQNLSLSHLLVGRKILIVDDNGVNRAVAAGALKKYGADVVCVSSGKDAISSLKPPHQFDACFMDIQMPEMDGFEATGRIREMEQNVNREASINWHVPILAMTADVIQATHEKCLRCGMDGYVSKPFEAEQLYREVSRFFLSS* 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2811 970 Gene3D - 456 667 IPR036890 -
Mtr8g2811 970 CDD REC_hyHK_CKI1_RcsC-like 843 963 - -
Mtr8g2811 970 SMART HisKA_10 392 457 IPR003661 GO:0000155|GO:0007165
Mtr8g2811 970 Gene3D CHASE domain 109 338 IPR042240 -
Mtr8g2811 970 SMART CHASE_2 105 306 IPR006189 -
Mtr8g2811 970 ProSiteProfiles Response regulatory domain profile. 842 967 IPR001789 GO:0000160
Mtr8g2811 970 SMART HKATPase_4 504 667 IPR003594 -
Mtr8g2811 970 PRINTS Bacterial sensor protein C-terminal signature 592 606 IPR004358 GO:0016310|GO:0016772
Mtr8g2811 970 PRINTS Bacterial sensor protein C-terminal signature 610 620 IPR004358 GO:0016310|GO:0016772
Mtr8g2811 970 PRINTS Bacterial sensor protein C-terminal signature 627 645 IPR004358 GO:0016310|GO:0016772
Mtr8g2811 970 PRINTS Bacterial sensor protein C-terminal signature 651 664 IPR004358 GO:0016310|GO:0016772
Mtr8g2811 970 Gene3D - 837 969 - -
Mtr8g2811 970 SMART REC_2 841 963 IPR001789 GO:0000160
Mtr8g2811 970 Gene3D - 361 455 - -
Mtr8g2811 970 Coils Coil 369 389 - -
Mtr8g2811 970 CDD HisKA 392 453 IPR003661 GO:0000155|GO:0007165
Mtr8g2811 970 Gene3D - 56 108 - -
Mtr8g2811 970 ProSiteProfiles Response regulatory domain profile. 695 817 IPR001789 GO:0000160
Mtr8g2811 970 Pfam His Kinase A (phospho-acceptor) domain 392 455 IPR003661 GO:0000155|GO:0007165
Mtr8g2811 970 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 377 458 IPR036097 GO:0000155|GO:0007165
Mtr8g2811 970 ProSiteProfiles CHASE domain profile. 105 331 IPR006189 -
Mtr8g2811 970 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 446 662 IPR036890 -
Mtr8g2811 970 CDD HATPase_EvgS-ArcB-TorS-like 509 665 - -
Mtr8g2811 970 CDD PRTases_typeI 792 870 IPR000836 -
Mtr8g2811 970 Pfam CHASE domain 108 304 IPR006189 -
Mtr8g2811 970 SUPERFAMILY CheY-like 840 965 IPR011006 -
Mtr8g2811 970 ProSiteProfiles Histidine kinase domain profile. 399 667 IPR005467 -
Mtr8g2811 970 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 504 665 IPR003594 -
Mtr8g2811 970 Pfam Response regulator receiver domain 843 962 IPR001789 GO:0000160
Mtr8g2811 970 PANTHER HISTIDINE KINASE 3 14 969 - -
Mtr8g2811 970 SUPERFAMILY CheY-like 691 818 IPR011006 -
Mtr8g2811 970 PANTHER TWO-COMPONENT HISTIDINE KINASE 14 969 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2811 Mtr-Chr8 38808085 38814378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2811 1 967 Miscellaneous Gene Families AT1G27320 68.673 0.0 1342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr8g2811 CHASE 1.7e-36 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2811 K14489 - gmx:100776798 1629.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2811 8 38808085 38814378 Mtr8g2811 8 38808085 38814378 ECH