Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2775 ATGGCCCAAAAATATTTGAAGCTTTTCTTTCTATGTCGATTAGTGCCACTGCAAGTGTCCATCACCGTCACGACTACAGTCACAGAGCACTACATTAGCCGCTTAAGTCATTTCGATCCAATTTCCTTCAAAGGAATCAAATTTCATCATAATCATTCTTGGTTTCTTCTTCTTCACTATATTACAAACATTTTTCAGTCACTTCAACTTCAACCAACAATGGCTATTTTAGATGTTCTCTTAGGAACGATCAATGTAACATTTTTCTATGTCATTTTAATATGGGTTTTATTTGATAGTTTAAGACAAAGCACACGTAACAATCTTCAACATTTCAAACACACACCAACAATTTTCTCTTATATCACTGTTTTTTTCAATGCTGTGATTTCCCTTTTGAACATAGCTTTTGTTTTCTATGATTACACTACACGTGGAATCATAGGATTTAACTATGTTTCTTTTGGTTTAACATGGGTTTTAGCTACTATGGTTTCATTCTATTCAATGAAGAAAACACTTAGAGAGAATAAAAGATTTCCTTTTGTTCTAATTCTTTGGTGGTTCTTTGTCACATTTGTTCATATAATCTCACTGTCTTTAAAACTTGTTAAGAATTCAAAATCCATCAACTTATGGATTTTGTTGTTGGAGAAGAATACTGTTGAAACAGTTTCTTTGCCTATGTTGTTAGTGATGTGTTTCAATGCATTTCCTAATGTGTGTGTAAGGGAACAAAGTGAAATAGAAGAAAGGTTACTTCAGAAAGAGTTTGAATCTTCTACTTTTGAAGATGAAGAGGCTTTTGCAAAAGCTGGTGTGTGGAGCAAACTTACATTTAGGTGGTTGAATCCTATATTTGAAATGGGTCGGATTCAGAAGCTTGAACATGTTAATGTTCCTTCTGTTCCTCCCTCTGAAACTGCTGCTAGTGCTTCTTCTATGTTGGAAGAATCTATTCGAAAACAGAAGCTTGAATGCGGTTCTTTGTCAAAAGCTATTGTTGATTCTGTTTGGAAATCATTGGCCTTAAATGCTGTTTTAGCAGGTGTTAACACTATTGCTGCTTATATTGGTCCCTTATTGATATCAAACTTTGTGAATTTTTTATTGTCGAATGATGATAATTCAAACATCAAATATGGATTGATTCTTGCCTTCATTTTCTTCCTCGCAAAAACTGTTGAGTCACTAAGTCAAAGACAATGGTACTTTGGTGCTCAACGAATCGGAATTCAGGTGCGTGCGGCACTTATGGCCTTAGTTTATAGCAAGTCACTAATGATTAAATGTGGCGGACCAACGCATGGTAAAATCATCAATTTGATTAATGTGGATGTTGAAAGAATTGGTGATTTTTGCTGGTATGTTCATGGAGTTTGGTTGCTTCCAGTTCAGATTATTTTGGCCTTGGTGATCTTATATATAAATTTGGGTTGCACACCTTCTATTGCTGCACTTGCTGTTACCATTTTGGTCATGGTGTGTAACACACCTTTGGCGAATATGCAAGAAGGTTTGCACTCTAAGATAATGGAAGCTAAAGATTCAAGAATCAAAATGACTTCAGAGACAATGAAGAACATTAGAATTTTAAAGTTGCATTCATGGGAATCGACATTTCTGCAGAAACTCTTACAACTTAGGGACACAGAGAAGAAGTGGTTGCACAAATACCTCTACTTATGCTCAGCAGTAGCCACGCTATTTTGGGCATCTCCAACTTTGGTTTCTGTTTTCACTTTTGGAGCTTGTATATTGGTGAAAACCGAGCTAACTGCAGCCACAGTCCTCTCGGCTCTTGCAACATTTCGTATTTTGCAAGAACCGATTTACAATTTGCCTGAACTTATTTCCATGATAACTCAAACAAAAGTCTCCGTCGATCGAATCCAAGAGTTCATAAAGGAAGAAGATCAAAATCAATTCATGAATAGGCATGCTTCCAAAACTTCAACAATTGCTATTGAAATAAAGCCAGGAGAGTATGCATGGGAAGCAAATGATCAATTCCTCAAGAAACCAACAATTCATATTGCAGAAAAATTGATGATAAAGAAAGGTCAAAAGGTAGCAGTTTGTGGGCCAGTAGGGTCTGGAAAATCAAGCTTGCTTTGCAGTATGCTTGGTGAGATTTCATTGGTTTCTGGGGCAGCAACCAAAGTTTATGGGACTAGAAGTTATGTACCCCAAAGTCCATGGATTCAATCTGGAACTATAAGAGAAAATATATTGTTCGGGAAGCAAATGAATAAGGACTTTTATGAAAATGTTGTGGATGGCTGTGCATTGCTCCAGGATATCAACTTATGGAGTGATGGAGATTTGACCATGGTGGAGGAGAGGGGAATAAATTTAAGTGGAGGACAAAAGCAGCGAATTCAACTGGCAAGGGCTGTTTACAATGACTCGGACATTTATTTCCTCGATGACCCTTTTAGTGCTGTTGATGCTCATACTGGGAGTCATATGTTTAAGGAATGTCTAATGAAACTTTTATACGATAAAACTGTTGTTTATGCTACACATCAACTGGAATTCTTGGAAGCTGCAGATCTTATTTTGGTTATGAAAGATGGAAAAATAGTGGAGTCCGGAAGGTATAGAGATCTCATAGCATGCCCTCATAGTGAATTTGTCCAGCAAATGGCTGCTCATGAAGAAACAGTATGCCAAATTCCATGCCGGAAAGATGATTCTGTTTGCTGCAGACCCTGCCAAAAAAATCCAACTGAAATTGCAGAAGAAAATATTCAAGAGATCATGTTGGATTGGAAGAGAACCAGAGAAGAGGAAGCAATGACTGGTCGAGTAAAATGGAGTGTTTATTCAACCTTTGTCACATTAGCTTATAGAGGAGCACTGGTTCCAATTATTCTTCTCTGCCAAATTCTATTTCAAGTTATGCAAATGGGAAGCAATTATTGGATGTCTTGGGCTACAGAAAAAAAGGGAAGGGTCGACAATGTGCAGCTTATGGGAGTTTTCGCTCTTTTATCTGGTGGAAGCTCCATCTTCATATTGGGAAGGACAGTTTTAATGGCAACAGTTTCCGTGGAAACAGCTCAGCGCCTTTTTCATGGAATGATCGCATCGGTTTTTAGGGCACCTGTTTCATTTTTTGATACCACTCCTTCTAGCCGAATTCTGAGTAGGTCATCCACAGATCAAAGTACAGTTGATACAGACATACCCTACAGATTAGCTGGACTAGTCTTTGCACTGATCCAGTTATTGAGTATCATTGTCCTTATGTCCCAGGCTGCATGGCAAGTCATTCTTCTCTTTTTCGTGGTTCTTGCTCTCTCTGTCTGGTATCAGGCCTATTACATCACTACGGCTAGGGAATTGGCCAGGATGGTGGGGATCCGAAAGGCACCAATCTTGCATCACTTCTCAGAGTCAATTGCTGGGGCTGCCACTATCCGTTGTTTCAAACAAGAGAAAATATTCCTGACCAAGGTTATGGTTCTAATTGACGATTATTCTCGGGTAGCCTTTCACAACTATGCCACCATGGAATGGTTGTCCGTCAGAATCAATTTTCTCTTCAATTTGGTATTCTATTTTGTTCTCGTCATCTTGGTTACTTTGCCAAGGTCTGCCATCAATCCCAGCTTGGCGGGTCTTGTTGCTACTTATGGTCTAAACTTGAATGTGCTTCAGGCTTGGGTGATATGGAATCTATGCAATGTTGAGAACAAAATGATCTCAGTAGAGAGAATATTGCAATTCTCTAATATACCAAGCGAAGCACCATTAATTATTCAAGATTGTAGACCTGAACCAGAGTGGCCTAAGGAAGGAAAAATTGAATTCCTTAACCTTCATATACAATATGATCCTTCTGGTCCTATGGTTCTCAAAGGTGTCACTTGCGTCTTCCCTGGACAAAAGAAAATTGCAGTAGTAGGCCGGACAGGGAGTGGAAAATCTACTCTGGTGCAAGCCCTCTTTCGAGTTGTGGAGCCTTTGGAAGGATGTATACTTATCGATGGTGTAAATATTTCCAAGATTGGTCTGCAAGATTTAAGATCAAAGCTTGGTATCATTCCTCAGGATCCAACCTTGTTTTTAGGTACTGTAAGGACTAACTTGGATCCGTTGGAACAACACACTGATCAAGACCTTTGGGAGGTTCTCAGGAAGTGCCATCTTGCGGAAATAGTACAGCAAGATCCAAGGCTTCTTGATGCACCAGTGGCCGAAAATGGGGAAAATTGGAGTGTTGGACAGAGACAACTAGTTTGCCTTGCTAGGTTGCTACTGAAGAAAAGAAAAATCTTGGTCCTAGACGAGGCAACTGCATCCATTGACACTGCAACTGATAATTTAATTCAGAAGACTATTAGGGAAGAAACAAGTGGATGCACAGTCATTACAGTAGCACATAGAATTCCTACTGTCATTGACAATGATTTGGTTTTGGTGCTTAATGAAGGGACAATTGCGGAGTATGATCAACCATCTCAATTGCTACAAGCCAATTCTTCTTCGTTCTCCAAGTTGGTGTCAGAATTTTTGAGAAGATCATCCCAAAGTAATTGCAAAAAAAGATAA 4560 0.3879 MAQKYLKLFFLCRLVPLQVSITVTTTVTEHYISRLSHFDPISFKGIKFHHNHSWFLLLHYITNIFQSLQLQPTMAILDVLLGTINVTFFYVILIWVLFDSLRQSTRNNLQHFKHTPTIFSYITVFFNAVISLLNIAFVFYDYTTRGIIGFNYVSFGLTWVLATMVSFYSMKKTLRENKRFPFVLILWWFFVTFVHIISLSLKLVKNSKSINLWILLLEKNTVETVSLPMLLVMCFNAFPNVCVREQSEIEERLLQKEFESSTFEDEEAFAKAGVWSKLTFRWLNPIFEMGRIQKLEHVNVPSVPPSETAASASSMLEESIRKQKLECGSLSKAIVDSVWKSLALNAVLAGVNTIAAYIGPLLISNFVNFLLSNDDNSNIKYGLILAFIFFLAKTVESLSQRQWYFGAQRIGIQVRAALMALVYSKSLMIKCGGPTHGKIINLINVDVERIGDFCWYVHGVWLLPVQIILALVILYINLGCTPSIAALAVTILVMVCNTPLANMQEGLHSKIMEAKDSRIKMTSETMKNIRILKLHSWESTFLQKLLQLRDTEKKWLHKYLYLCSAVATLFWASPTLVSVFTFGACILVKTELTAATVLSALATFRILQEPIYNLPELISMITQTKVSVDRIQEFIKEEDQNQFMNRHASKTSTIAIEIKPGEYAWEANDQFLKKPTIHIAEKLMIKKGQKVAVCGPVGSGKSSLLCSMLGEISLVSGAATKVYGTRSYVPQSPWIQSGTIRENILFGKQMNKDFYENVVDGCALLQDINLWSDGDLTMVEERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGSHMFKECLMKLLYDKTVVYATHQLEFLEAADLILVMKDGKIVESGRYRDLIACPHSEFVQQMAAHEETVCQIPCRKDDSVCCRPCQKNPTEIAEENIQEIMLDWKRTREEEAMTGRVKWSVYSTFVTLAYRGALVPIILLCQILFQVMQMGSNYWMSWATEKKGRVDNVQLMGVFALLSGGSSIFILGRTVLMATVSVETAQRLFHGMIASVFRAPVSFFDTTPSSRILSRSSTDQSTVDTDIPYRLAGLVFALIQLLSIIVLMSQAAWQVILLFFVVLALSVWYQAYYITTARELARMVGIRKAPILHHFSESIAGAATIRCFKQEKIFLTKVMVLIDDYSRVAFHNYATMEWLSVRINFLFNLVFYFVLVILVTLPRSAINPSLAGLVATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSNIPSEAPLIIQDCRPEPEWPKEGKIEFLNLHIQYDPSGPMVLKGVTCVFPGQKKIAVVGRTGSGKSTLVQALFRVVEPLEGCILIDGVNISKIGLQDLRSKLGIIPQDPTLFLGTVRTNLDPLEQHTDQDLWEVLRKCHLAEIVQQDPRLLDAPVAENGENWSVGQRQLVCLARLLLKKRKILVLDEATASIDTATDNLIQKTIREETSGCTVITVAHRIPTVIDNDLVLVLNEGTIAEYDQPSQLLQANSSSFSKLVSEFLRRSSQSNCKKR* 1520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2775 1519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 682 874 IPR027417 -
Mtr8g2775 1519 Gene3D - 1254 1507 IPR027417 -
Mtr8g2775 1519 CDD ABCC_MRP_domain2 1269 1489 - -
Mtr8g2775 1519 PANTHER OS01G0902100 PROTEIN 181 1514 - -
Mtr8g2775 1519 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 958 1234 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g2775 1519 Gene3D ABC transporter type 1, transmembrane domain 924 1252 IPR036640 GO:0005524|GO:0016021
Mtr8g2775 1519 Gene3D ABC transporter type 1, transmembrane domain 330 641 IPR036640 GO:0005524|GO:0016021
Mtr8g2775 1519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1263 1497 IPR027417 -
Mtr8g2775 1519 CDD ABC_6TM_ABCC_D1 344 631 IPR044746 GO:0140359
Mtr8g2775 1519 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 658 884 IPR003439 GO:0005524
Mtr8g2775 1519 CDD ABCC_MRP_domain1 656 861 - -
Mtr8g2775 1519 CDD ABC_6TM_ABCC_D2 956 1246 IPR044726 GO:0140359
Mtr8g2775 1519 SUPERFAMILY ABC transporter transmembrane region 338 638 IPR036640 GO:0005524|GO:0016021
Mtr8g2775 1519 Pfam ABC transporter transmembrane region 960 1198 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g2775 1519 Pfam ABC transporter transmembrane region 344 610 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g2775 1519 SMART AAA_5 687 861 IPR003593 -
Mtr8g2775 1519 SMART AAA_5 1297 1490 IPR003593 -
Mtr8g2775 1519 Gene3D - 680 900 IPR027417 -
Mtr8g2775 1519 SUPERFAMILY ABC transporter transmembrane region 956 1251 IPR036640 GO:0005524|GO:0016021
Mtr8g2775 1519 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 343 623 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g2775 1519 Pfam ABC transporter 683 813 IPR003439 GO:0005524
Mtr8g2775 1519 Pfam ABC transporter 1288 1436 IPR003439 GO:0005524
Mtr8g2775 1519 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1271 1505 IPR003439 GO:0005524
Mtr8g2775 1519 ProSitePatterns ABC transporters family signature. 786 800 IPR017871 GO:0005524
Mtr8g2775 1519 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 181 1514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2775 Mtr-Chr8 38419783 38426601 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2775 671 905 Calmodulin-binding Proteins AT2G36910 27.559 1.83e-18 90.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2775 8 38419783 38426601 Mtr8g2775 8 38419783 38426601 ECH