Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2770 ATGGAAATTGAATTAATTTCTAGAGAAACCATCAAACCTTCATCACCAACTCCTTCTCACCTCAAAATATACCCACTTTCTTTCATAGACAACATTTTGATGCGTAACTATGTGCCATTACTTTACTTTTACAAACCAAACAAAGATAGTGACCAAAATGTCAAAATTTCACAATTACGTAAATCTTTATCTCAACTTTTATCCAAATATTATCCTTTTGCTGGAAGGTTGAAAGATAAAATTACCGTCGAATGTAATGATCAAGGTGTGCCGTTTCTAGTCACAAATGTCAAAAACAAACTATCAGAAGTCCTCCAAAACCCTATAGAAAAATTGTTGAACCCTTTGTTCCCGGATGAATTGCAATGGAAAGAAATGGATTGGAGTGAAACTTTAATAGCCATTCAAATCAACTGTTTTGCATGTGGAGGAATGGCGATAAGTGTTTGCATGAGTCACAAAATTGGTGATGGTTCGACACTTTTCAACTTCATGAATGATTGGTCCATTATCAACGAAAATTTACCAAAAGAAAAAGAAGGAGAAAAAGGGTTATTAGAATTACCCTTTCATTTCCTTGATGGAGGAGCTTCAATGTTTCCACAAAGAGATTTACCTATTTTTCAAGAACTTGTTCTTAAGAGAGAAAACAATGTGGTGTGTAAAAGATTTGTGTTTCAACCCTCAATGATCAAGTCCCTTAAGAAAATGGCAACTTCTAGTTCGGTGCATTCTCCCACACGTGTACAAGTTGTGACTGCATGGATTTACAAATGCACGGTTTCAATAACGGGATTAAATTTCAAGACATCATTGTTTAGTATGGCTGTTGATTTTCGCAAAAGAATGGTTCCTCCGTTGTCTGAAAAATGTGTAGGGAACATATTTTGGTTCTCGTCTATGTTTGCAGATAAGAAGGAAATGGAACTAAAGGATTTGGTATGCAAAATAAAAGAAGGGTTATCTGAATGTTGTGACGTTTATCCAAAAATATTTGGAGGGAAAAAGAATGATAATTTGTTAAAAATATCTGAATGCTTGAAACAAGTTACTGAGTCTTATTCTGAGAATGGAAATTTGATTAGTTTTAGTAGTTGGTGTAGGTTTCCAATGTATGAAGCTGATTTTGGGTGGGGAAAACCAATATGGGTGACAACTAGTGCTTGTTACGTGAGGAATGGGATAATTTTGATGGATACAAGAGATGGGGATGGGATTGAAGCGGTTGTGAATATGGAAGAGAATGATATGACTAAGTTTGAGCATGAAGTGAAGCTTCTTCAATATGCCTCTCTTAATCCAACCAATGTTTAA 1314 0.3508 MEIELISRETIKPSSPTPSHLKIYPLSFIDNILMRNYVPLLYFYKPNKDSDQNVKISQLRKSLSQLLSKYYPFAGRLKDKITVECNDQGVPFLVTNVKNKLSEVLQNPIEKLLNPLFPDELQWKEMDWSETLIAIQINCFACGGMAISVCMSHKIGDGSTLFNFMNDWSIINENLPKEKEGEKGLLELPFHFLDGGASMFPQRDLPIFQELVLKRENNVVCKRFVFQPSMIKSLKKMATSSSVHSPTRVQVVTAWIYKCTVSITGLNFKTSLFSMAVDFRKRMVPPLSEKCVGNIFWFSSMFADKKEMELKDLVCKIKEGLSECCDVYPKIFGGKKNDNLLKISECLKQVTESYSENGNLISFSSWCRFPMYEADFGWGKPIWVTTSACYVRNGIILMDTRDGDGIEAVVNMEENDMTKFEHEVKLLQYASLNPTNV* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2770 437 Gene3D - 216 431 IPR023213 -
Mtr8g2770 437 Gene3D - 1 206 IPR023213 -
Mtr8g2770 437 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 436 - -
Mtr8g2770 437 PANTHER F21J9.9 5 436 - -
Mtr8g2770 437 Pfam Transferase family 1 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2770 Mtr-Chr8 38370835 38372270 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2770 1 421 Monolignol Biosynthesis Gene Families AT5G48930 23.438 8.43e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2770 - - mtr:MTR_5g084900 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2770 8 38370835 38372270 Mtr8g2770 8 38370835 38372270 ECH