Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2768 ATGGTACACAACAGGTCTCTTGTCTATGACAACATGGATAATGCTTGCTTTCCTTCTCCACACCTTGATGCTTTTCCAGCTGGTCTACGAGTACTCGTTGTTGATGATGATCTAACTTGCCTCAGAATCCTTGAAAAAATGCTCAAAAAATGCTTTTACCGAGTGACCACATGTTGCTTAGCAATAGAGGCTCTTAAGAAGCTCCGCGAAAGTAAAGGTACATATGACATAGTGATCAGCGATGTAAACATGCCTGACATGGATGGTTTCAAACTTCTTGAACATGTTGGACTTGAGATGGATCTTCCTGTCATTATGATGTCTGTTGATGGAGAAACAAGCAGGGTGATGAAAGGTGTTCAACATGGAGCATGTGATTATTTGCTTAAGCCTATAAGGATGAAAGAAGTGCGAAACATATGGCAACATGTCTTAAGAAAAAGAATACGTGAGGCAAGAGAATTTGAAAGTCTTGAGGGAATTCACTTAATGAGGAATGGATCAGATCACACTGATGATGGTAACCTGTTTGCTGTAGGAAAAGAAATGAACTTAATGAAGAAAAGGAAAGATTTTGATAGTAAACATGATGACCAAGTATTCTTAGATCAAACTTTCATAAAGAAAGCTAGAGTAGTTTGGTCTGTGGATCTTCATCAGAAATTTGTTAAAGCGGTGAATCAGCTTGGATTCGATAAAGTTGGTCCCAAGAAAATTCTAGATTTGATGAATGTTCCATGGCTGACTAGAGAAAATGTTGCTAGTCATTTGCAGAAATACCGGCTCTACTTGAGTAGGTTGCAAAAGAAAAATGATCAGAAATCGTCCTCAGGTGGAATAAAGCATTCAGATTTACCTTCAAAAGATCCAGGATGTTTAAGCTTTCTCAACTCTTTCAACAAGCAACAAAAGGAAGGTGCAATCGACAGCTTTGGATATTCAGACGGGACATTAAAAATTCAAATGGATACTACGAGTCATGAAAAAAGAAGAGCTTCAACTAGTGACATTCCTAATCCAAAGATAAGAAAGAGTTCAGAGATAGGTCTTAACCAATCTCTTGAATCTGCAGAATCAGAAGCAAACCATACAGTATTTGACTCCGTCATACCAACACAGTACTCTTGGAATGAAGTTCCAAAAAGGCCACTCGGAGAAGAACTTAACACACTTGTACAATTAAAGGATAATCTCAGCCATTTGCCATTAAATGTTACACAGCAACACTTCCAAAATGACCGATCACTATCAATTAATTCCAATCCCTCCGGTTACAAAAGTGATTACATTAGACCTGTGAATTCAACGGTGTCTTCAGTTGATACCTTTCCTAGTCAGTCCAAAAGCGATATCATTTTCACTTCAAATTTGAGTTTAAAAACACCAAAATTTAATCTTGGCTGCGCTTCTGATATGGAAATCTACCAAAGAAACTTACTTTTGGGTATTGAGTCAGCTTCAACACCTTTGGACGAGGACTTAAATTTGTTCTTGTTACAAGGTGAATACTATGATATGAACTTTGACATGCAGAATATAGAGATGTCAGAGTATTATGATCCAAGGCTTATTCCTGAAGTTCCTACCAATTTGTATGCTTCAGGAGATTATTCTTAG 1617 0.3754 MVHNRSLVYDNMDNACFPSPHLDAFPAGLRVLVVDDDLTCLRILEKMLKKCFYRVTTCCLAIEALKKLRESKGTYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEVRNIWQHVLRKRIREAREFESLEGIHLMRNGSDHTDDGNLFAVGKEMNLMKKRKDFDSKHDDQVFLDQTFIKKARVVWSVDLHQKFVKAVNQLGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLQKKNDQKSSSGGIKHSDLPSKDPGCLSFLNSFNKQQKEGAIDSFGYSDGTLKIQMDTTSHEKRRASTSDIPNPKIRKSSEIGLNQSLESAESEANHTVFDSVIPTQYSWNEVPKRPLGEELNTLVQLKDNLSHLPLNVTQQHFQNDRSLSINSNPSGYKSDYIRPVNSTVSSVDTFPSQSKSDIIFTSNLSLKTPKFNLGCASDMEIYQRNLLLGIESASTPLDEDLNLFLLQGEYYDMNFDMQNIEMSEYYDPRLIPEVPTNLYASGDYS* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2768 538 CDD REC_typeB_ARR-like 31 145 - -
Mtr8g2768 538 Gene3D - 205 268 - -
Mtr8g2768 538 SUPERFAMILY Homeodomain-like 207 266 IPR009057 -
Mtr8g2768 538 PIRSF RR_ARR_type-B 7 513 IPR017053 GO:0003677|GO:0003700|GO:0009736
Mtr8g2768 538 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 520 - -
Mtr8g2768 538 SMART REC_2 29 141 IPR001789 GO:0000160
Mtr8g2768 538 Pfam Response regulator receiver domain 31 139 IPR001789 GO:0000160
Mtr8g2768 538 SUPERFAMILY CheY-like 28 156 IPR011006 -
Mtr8g2768 538 MobiDBLite consensus disorder prediction 324 343 - -
Mtr8g2768 538 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 520 IPR045279 GO:0009736
Mtr8g2768 538 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 209 262 IPR006447 GO:0003677
Mtr8g2768 538 Gene3D - 29 190 - -
Mtr8g2768 538 ProSiteProfiles Response regulatory domain profile. 30 145 IPR001789 GO:0000160
Mtr8g2768 538 Pfam Myb-like DNA-binding domain 211 261 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2768 Mtr-Chr8 38356991 38360680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2768 22 275 Response Regulator Gene Family AT2G25180 56.154 4.16e-84 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mtr8g2768 Response_reg 9e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2768 - K14491 gmx:100778324 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2843 3 42398155 42402740 Mtr8g2768 8 38356991 38360680 PCT