Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2756 ATGGAACGAGTTGTTGATGAAACAGATTGATTGCTTCGTGAGGCATACCAATCATGGTTGCCTACTGTGCTTGAACTGATCCAATCTAATGATGATGGTTTTTCCCTACCGTCTGCTTCTTTTTTCCCCTGTTCTGCTAGTGCATTAAGAACCAGAAGAAGATGTGGAGTTGAGAGGGGGTTCAAGGACAAGCCTTATCCCAGGCTGGCAAAGATGGTTCTATCTGCGACATTAACTCATATCCAGCTTAATTTGCACCACCCTTTATTATTGAAAGCTGGACAAATGCGTTATCGGCTCCCAGAAGAAAATTTGGAATCTTATAAACTGATTTGTGAAAAAAAGGTCAAGCCTTTATATTTAATTGCCCTTTTGAAATCCCTGGGAGAAGAAAAGTGACTGGTTTTTACAAAATCTGTGGATTCAACACATCGTCTCCGCCAATTGCTAAATTGTTTTGAAGATCTGCGAATTGATATCAAGGAGTATTCTAGTTTACAACATCAACGTGTAAGAAGCAAGACATTGAACGAATTCCGTAAAGGGGTGTTTCAAGTGCTTCTATCTTCTGATGCATTGACTCGTGAGATGGATGTTGAAGGGGTAAGAAATGTCATTAATTATGACGTGCCCAAATTCATAAAAACTTATGTTCATCGGGCGGGCAGGACTGCAAGAGCTGTCCAGACTGGGCGTTGCTTCACATTGATGTCAGAAGATGAGGTTCGACGATTTAAGAAGTTAATTGGAAAGGCTGAGGGTGGTTCTTGTCTGGACCATATTGTTCCGTCCAGTCAAATTGAAGCACTCGATACTACCTACCAATCAGCACTGACAAAATATAAGGAGATAATTTCGAAGACACGAAAGAAACCCAAGAATTAG 885 0.4079 MERVVDETD*LLREAYQSWLPTVLELIQSNDDGFSLPSASFFPCSASALRTRRRCGVERGFKDKPYPRLAKMVLSATLTHIQLNLHHPLLLKAGQMRYRLPEENLESYKLICEKKVKPLYLIALLKSLGEEK*LVFTKSVDSTHRLRQLLNCFEDLRIDIKEYSSLQHQRVRSKTLNEFRKGVFQVLLSSDALTREMDVEGVRNVINYDVPKFIKTYVHRAGRTARAVQTGRCFTLMSEDEVRRFKKLIGKAEGGSCLDHIVPSSQIEALDTTYQSALTKYKEIISKTRKKPKN* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2756 292 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 119 268 IPR001650 -
Mtr8g2756 292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 245 IPR027417 -
Mtr8g2756 292 PANTHER RNA HELICASE 4 270 - -
Mtr8g2756 292 CDD SF2_C_DEAD 104 234 - -
Mtr8g2756 292 Gene3D - 102 292 IPR027417 -
Mtr8g2756 292 SMART helicmild6 145 226 IPR001650 -
Mtr8g2756 292 PANTHER ATP-DEPENDENT RNA HELICASE DDX51 4 270 - -
Mtr8g2756 292 Pfam Helicase conserved C-terminal domain 116 225 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2756 Mtr-Chr8 38210491 38219781 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2756 58 246 Eukaryotic Initiation Factors Gene Family AT3G19760 28.643 7.79e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2756 K14807 - csv:101217879 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2756 8 38210491 38219781 Mtr8g2756 8 38210491 38219781 ECH