Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2748 ATGGAGGAGGATGAGATTCAAGCCCAACATAAATTCCCAAGAGTTGAAAATGAGGAAGAAAATCATGGAAGAGATATCATTAGAAGAGGTGGAGGAGGATGTGATGGAAGTGCAAATCTTAACAGGTTCAATAATTGGCATCATTCTTCAAGAATTATAAGGGTTTCAAGAGCTTCTGGTGGAAAAGATAGGCATAGTAAAGTAATGACTTCAAAGGGTTTAAGAGATAGAAGGGTTAGGCTTTCTGTTACAACAGCTATTCAGTTTTATGATCTTCAAGATAGACTTGGTTATGACCAACCAAGTAAAGCTGTTGAATGGTTGATAAAATCAGCTTCTGATGCTATTTCAGAACTACCTTCACTCAACAACTCATTATTCTCTGGTGATACACCTAATAATAATAATAATAATAATAATAATAATAATAATAGTAATAATCAGCCAAGTGAACAAGGTGTTGATTCAGTTCATGATTCTGAAATGGTTGTTGAGAATGGTGAAAACAATTATCAAAGTCAGAATCTTTCTTTGTCTAAATCTGGTTGTAGTAGCACTTCTGAGACAAGTAAAGGTTCTGGTTTGTCTCTTTCAAGATCTGATGTTCGTGTGAGCCGTGTCAAAGCTAGAGAAAGAGCAAGAGAAAGAACTGCTAAGGAGAAGGACAAAGAGATTAATCATGAATCTCACAATACTCATCAACAGCATCACAACAATGTGACCTCTTCCATTTCTCAAACAGCTTCATTCACTGAACTACTTACTTGTGGAATCAACAATACTGTTACTACCACAAATAGTCCAAGAGGGTCAGCTGAAGAACCTAGTTTTTTCAACAAAGCTAGACAGCAACAGCAGCAGCAGCAGCAATGGAATTCTTCAGCACCAATGGATCATTACTTTAGTCAAGTATTTCCAGGATCTTCATCATCAAGGGCACATCATCATCATCATCTATTAGGACATTCACTTCATGATCATCAATCAATGACAATGTCTAATTCAGTTTCACCATTCAGTACTAGTGGTGAGAATCATTCTCAAGATCAGCATCAGCATCATTTGCAGCATCCATTTTCATTCATACCAGATCATATGATGCAAAATGTGGTTACTTCTTCTTCTACTCAACCAAGCGGGAACAACAATGATTATAATCTGAATTTCACAATCTCTTCGGGCCTTGCTGGTTATAATAGGGGGACCCTTCAGTCCAATTCACCGTCTCTTTTGTCTCATCTTCAAAGGTTTGCAGTTTCACCTTTAGATGGATCCAACAATCTACCTTTTTTCATGGGAGGAGGTGGAGGAGGTGCTTCTGCTTCTTCTTCTCCTGCTTCAGCTTCACCTTCAGCTGCTCCTACAATGGAGAATAATCATCATCACCATCACCAGATTCAACACCATCTGATTTCATCTGTTTTTGATGGTAGCAGCTTGCAGCTCTATTCAGATCAGAAAGGGAAACCCAAAAACTGA 1479 0.3807 MEEDEIQAQHKFPRVENEEENHGRDIIRRGGGGCDGSANLNRFNNWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSASDAISELPSLNNSLFSGDTPNNNNNNNNNNNNSNNQPSEQGVDSVHDSEMVVENGENNYQSQNLSLSKSGCSSTSETSKGSGLSLSRSDVRVSRVKARERARERTAKEKDKEINHESHNTHQQHHNNVTSSISQTASFTELLTCGINNTVTTTNSPRGSAEEPSFFNKARQQQQQQQQWNSSAPMDHYFSQVFPGSSSSRAHHHHHLLGHSLHDHQSMTMSNSVSPFSTSGENHSQDQHQHHLQHPFSFIPDHMMQNVVTSSSTQPSGNNNDYNLNFTISSGLAGYNRGTLQSNSPSLLSHLQRFAVSPLDGSNNLPFFMGGGGGGASASSSPASASPSAAPTMENNHHHHHQIQHHLISSVFDGSSLQLYSDQKGKPKN* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2748 492 MobiDBLite consensus disorder prediction 436 468 - -
Mtr8g2748 492 ProSiteProfiles TCP domain profile. 61 119 IPR017887 -
Mtr8g2748 492 MobiDBLite consensus disorder prediction 261 294 - -
Mtr8g2748 492 Pfam TCP family transcription factor 60 222 IPR017887 -
Mtr8g2748 492 MobiDBLite consensus disorder prediction 203 234 - -
Mtr8g2748 492 MobiDBLite consensus disorder prediction 1 24 - -
Mtr8g2748 492 MobiDBLite consensus disorder prediction 440 456 - -
Mtr8g2748 492 MobiDBLite consensus disorder prediction 329 346 - -
Mtr8g2748 492 MobiDBLite consensus disorder prediction 171 244 - -
Mtr8g2748 492 MobiDBLite consensus disorder prediction 329 351 - -
Mtr8g2748 492 MobiDBLite consensus disorder prediction 123 157 - -
Mtr8g2748 492 MobiDBLite consensus disorder prediction 171 200 - -
Mtr8g2748 492 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 491 IPR005333 GO:0003700
Mtr8g2748 492 ProSiteProfiles R domain profile. 203 221 IPR017888 -
Mtr8g2748 492 PANTHER TRANSCRIPTION FACTOR TCP24 1 491 - -
Mtr8g2748 492 MobiDBLite consensus disorder prediction 123 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2748 Mtr-Chr8 38105105 38112571 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2748 41 492 TCP Transcription Factor Family AT4G18390 40.126 3.52e-71 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mtr8g2748 TCP 1.2e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2748 - - lang:109362619 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2748 8 38105105 38112571 Mtr8g2748 8 38105105 38112571 ECH