Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2731 ATGATATCAGCTGAGGCACCTATTTTGTTTGCTAAGGCGTGTGAAATGTTTATTATGGAGCTTGCAACAAGATCATGGGCTAATGCAGAGGTGAACAAAAGAAATACACTTCAAAAGACTGATATTGCATCTGCTGTCTCAAGTAATGCAGTGTTTGATTTCCTAGTTGATATTGTCCCCAGGGAAAAAACAATGGAGCGTGACATATTTATGGGTATACCAAGAAGAGAAAATGTTCGAAAAATGTTCCTTATTATCTACCTATACCTACCTATGCCGGTTCATGTTCCACCTCAATATGCTGCAGGTCCATCATATGGTCCTCCAAGAATGCTTATGGGAAGACATCTTCCCAATCAACCTCCATCACATCCTTTTGCAAATCAAATATTTCCGACCCCAAAGAAAGAAAACGACCCTTCTACTGATTTTTCAAATTCAGACGATTAA 450 0.3889 MISAEAPILFAKACEMFIMELATRSWANAEVNKRNTLQKTDIASAVSSNAVFDFLVDIVPREKTMERDIFMGIPRRENVRKMFLIIYLYLPMPVHVPPQYAAGPSYGPPRMLMGRHLPNQPPSHPFANQIFPTPKKENDPSTDFSNSDD* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2731 149 Pfam Core histone H2A/H2B/H3/H4 1 46 IPR007125 GO:0003677
Mtr8g2731 149 SUPERFAMILY Histone-fold 1 61 IPR009072 GO:0046982
Mtr8g2731 149 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 78 - -
Mtr8g2731 149 MobiDBLite consensus disorder prediction 134 149 - -
Mtr8g2731 149 Gene3D Histone, subunit A 1 61 IPR009072 GO:0046982
Mtr8g2731 149 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA 1 78 IPR027170 GO:0003700|GO:0006355|GO:0016602
Mtr8g2731 149 MobiDBLite consensus disorder prediction 117 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2731 Mtr-Chr8 37934572 37935989 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2731 1 121 CCAAT-HAP5 Transcription Factor Family AT1G54830 46.774 2.28e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mtr8g2731 Histone 1.7e-09 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2731 K08066 - aprc:113855583 127.872