Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2714 ATGGACAAATCTCATAGCTTTTTTCACAGTATTTTCAAACACTTTAAATGCGGTTACAACACAGAGGGAGACAATGAAGCTGAGTTACAAAAAATGGCTTCACGGGAGCAGAAGATATTTTCATACGAAACCCTGCTTTCTGCCACCAAGAATTTTAATGCTACTCATAAGTTAGGTGAGGGTGGTTTTGGACCTGTCTACAAGGGGAAACTGAGTGATGGGAGAGAAGTTGCAGTGAAGAAGTTATCACAGACATCAAATCAAGGGAAGAAGGAGTTTATGAATGAGGCAAAATTGTTGGCTCGTGTGCAGCATAAGAATGTGGTGAATTTGTTGGGTTATTGTGTTCATGGCACAGAGAAGATACTTGTTTATGAGTATGTGCCTCATGAAAGCCTAGACAAATTTCTATTCAAAGAAGCTGAGAAGAGAGAACAGCTTGATTGGAAACGTAGGTTTGGCATAATCACAGGCGTGGCAAAGGGGTTACTCTATCTACACGAAGACTCACACAATTGTATAATTCATCGAGACATCAAGGCCAGTAATATATTGCTTGATGACAAATGGACGGCTAAGATTGCAGATTTTGGAATGGCACGTCTCTTCCCTGAAGATCAAAGCCAAGTTAAAACACGTGTGGCTGGAACCAACGGATATATGGCTCCGGAATATATGATGCATGGAAGACTGTCTGTCAAAGCCGACGTGTTTAGCTATGGGGTTTTGGTATTGGAGTTGATCACTGGCCAAAGAAACTCATCCTTTAATTTAGACGTGGAGGAGCATAACCTTCTTGATTGGGCATACAAGATGTACAAGAAAGGAAGGAGCTTAGAAATTGTAGATTCTGCATTAGCATCTACGGTGTTAACGGAACAAGTAGATATGTGTATTCAGCTAGCTTTGCTATGCATTCAAGGAGATCCACAGCTACGTCCAACAATGAGGCGCATAGTGGTGAAGCTTTCAAGAAAATCACCACAAAGCCACATGGAACAACCAACAAGACCAGGAATACCAGGTAGCAGATATAGAAGACCTCCTAGACATTCTGCTTTGTCTTCCACAGTTGGTACTTCTGCTGCCTCTTATTCTCAATCTTCTGATTCAAGCAACAACTTTGGCACTTCTACTACCACCGTCACTGGTAGAAGTTCAGCTACTGCTGAATTAGATCCGAGAGGGAAACGTCCAATGCAGGATTAG 1209 0.4194 MDKSHSFFHSIFKHFKCGYNTEGDNEAELQKMASREQKIFSYETLLSATKNFNATHKLGEGGFGPVYKGKLSDGREVAVKKLSQTSNQGKKEFMNEAKLLARVQHKNVVNLLGYCVHGTEKILVYEYVPHESLDKFLFKEAEKREQLDWKRRFGIITGVAKGLLYLHEDSHNCIIHRDIKASNILLDDKWTAKIADFGMARLFPEDQSQVKTRVAGTNGYMAPEYMMHGRLSVKADVFSYGVLVLELITGQRNSSFNLDVEEHNLLDWAYKMYKKGRSLEIVDSALASTVLTEQVDMCIQLALLCIQGDPQLRPTMRRIVVKLSRKSPQSHMEQPTRPGIPGSRYRRPPRHSALSSTVGTSAASYSQSSDSSNNFGTSTTTVTGRSSATAELDPRGKRPMQD* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2714 402 SUPERFAMILY Protein kinase-like (PK-like) 37 321 IPR011009 -
Mtr8g2714 402 Pfam Protein tyrosine and serine/threonine kinase 54 323 IPR001245 GO:0004672|GO:0006468
Mtr8g2714 402 Gene3D Transferase(Phosphotransferase) domain 1 128 337 - -
Mtr8g2714 402 Gene3D Phosphorylase Kinase; domain 1 16 127 - -
Mtr8g2714 402 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 372 - -
Mtr8g2714 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Mtr8g2714 402 PANTHER RECEPTOR-LIKE KINASE 3 372 - -
Mtr8g2714 402 SMART serkin_6 52 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2714 402 MobiDBLite consensus disorder prediction 353 388 - -
Mtr8g2714 402 ProSiteProfiles Protein kinase domain profile. 52 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2714 402 CDD STKc_IRAK 58 325 - -
Mtr8g2714 402 MobiDBLite consensus disorder prediction 323 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2714 Mtr-Chr8 37759945 37764405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2714 40 340 Receptor kinase-like Gene Family AT4G11530 53.465 8.01e-110 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g2714 PK_Tyr_Ser-Thr 6.7e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2714 - - gmx:100795769 628.246