Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2698 ATGGGACGAGTCCGAACCAAAACCGTGAAGAAATCCTCTCGTCAAGTCATCGAGCGTCACTGCCCTAGAATGACACTGGATTTCCACACCAACAAGAAGATCCTTGAAGAAGTTGCTTTGATTCCATCAAAGCGTCTTCGTAACAAGATTGCTGGATTCTCCACTCTTCTCGTGAAGCGTATCCAAAAGGGACCTGTTTGTGGAATCTCCTTGAAGCTGCAAGAGGAGGAGCGTGAGCGTCGTATGGATTTCGTTCCTGATGTTTCTGCTATTAGGACTGATCATATTGAGGTTGATAAGGAAACTCTTGACATGCTTGCTGCTCTTGGCATGTCGAAGATTCCCGGTGTTGTTCAGGTTGATCATGTTCCTGTTCAGCAGATCTCGTTTGTTCGTGGTGCTGGTGCTGGACGGAGGTTTTAA 423 0.4681 MGRVRTKTVKKSSRQVIERHCPRMTLDFHTNKKILEEVALIPSKRLRNKIAGFSTLLVKRIQKGPVCGISLKLQEEERERRMDFVPDVSAIRTDHIEVDKETLDMLAALGMSKIPGVVQVDHVPVQQISFVRGAGAGRRF* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2698 140 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
Mtr8g2698 140 PANTHER 40S RIBOSOMAL PROTEIN S17 1 140 IPR001210 GO:0003735|GO:0005840|GO:0006412
Mtr8g2698 140 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Mtr8g2698 140 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Mtr8g2698 140 PANTHER 40S RIBOSOMAL PROTEIN S17 1 140 - -
Mtr8g2698 140 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2698 Mtr-Chr8 37600630 37601066 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2698 1 138 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 76.812 2.11e-71 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2698 K02962 - cpap:110810532 224.942