Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2688 ATGGGACGAGTCCGAACCAAAACCGTGAAGAAATCCTCTCGTCAAGTCATCGAGTGTCACTGCCCTAGAGTGACACTGGATTTCCACACCAACAAGAAGATCCTTGAAGAAGTTGCTTTGATTCCATCAAAGCGTCTTCGTAACAAGATTGCTGGATTCTCCACTCTTCTCATGAAGCGTATCCAAAAGGGACCTGTTCGTGGAATCTCCTTGAAGCTGCAAGAGGAGGAGCGTGAGCGTCGTATGGATTTCGTTCCTGATGTTTCTGCTATTAGGACTGATCATATTGAGGTTGATAAGGAAACCATTGACATGCTTGCTGCTCTTGGCATGTCGAAGATTCCTGGTGTTGTTCATGTTGATCGTGTTCCTGTTCAGTAG 381 0.4593 MGRVRTKTVKKSSRQVIECHCPRVTLDFHTNKKILEEVALIPSKRLRNKIAGFSTLLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIRTDHIEVDKETIDMLAALGMSKIPGVVHVDRVPVQ* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2688 126 PANTHER 40S RIBOSOMAL PROTEIN S17 1 124 IPR001210 GO:0003735|GO:0005840|GO:0006412
Mtr8g2688 126 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Mtr8g2688 126 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Mtr8g2688 126 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Mtr8g2688 126 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
Mtr8g2688 126 PANTHER 40S RIBOSOMAL PROTEIN S17 1 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2688 Mtr-Chr8 37485970 37486587 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2688 1 121 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 83.471 5.40e-70 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2688 K02962 - gmx:100785402 214.927