Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2660 ATGGCTGTTCCAAGTTCTGTTTTGAAGGTAGAGGAAATTCTAGGTAGAGGAAGAGGAATTGTTGCATCTCAACCTCTCAAAGCTGGTCAAATCATCCTCACAGATTCACCAATCCTTCTCTACCCTACCACCCCCTTTTCTCATCACTCTTCTTCCTTCTGTGATCATTGCTTCAAATCTTTACATTCATCATTTGTTTCATGTTCTTCTTGTAACCGATATCGCTTTTGTGATTCAACTTGTCTCTCAAAAGCACTCAATTCATCACATTCCACATGGGTTTGTCAAGCATTATCTCAGCTCCAAAGCAATCCTCTTTTGCTGCAACAACCCCTCGAACGTCAACTTCAAGCGCGTTTTCTTGTTGCTGCTTACAATCTTGCTATTACCACCCCTTCAAATTTTCAAATTTTGTTATCTCTACAGGGTTCTCCTGATAATGATGAAGCAGCAAACTTCCTACACCCCATTATTGCATCCCTTCTTTCGCACCCTCATAATGAATTGTTTTCGTTACAACTTACTTCTTCGCTGCTTGCTAAAGATAAGCTTAATGCTTTTGGTTTAATGCATCCTTTCTCTGAAACCGATGAAAATAGGTCTGTTAGAGCTTATGGCATTTACCCTTATGCCTCGTTTTTCAACCATGATTGTCTTCCTAATGCGTGTAGATTTGATTATGTCGATGTTAATCCACCTTATGATGTCGCGGCCGGTCTTAGTAATACTGATTTTGTTATTAGGATGATTCATGATGTTCCTCAAGGTAGGGAGATTTGTTTGAGTTATTTTCCTGTTAATGAGAACTACTCTAGTAGGCAGAAGAGATTGTTGGAAGACTATGGTTTTGCGTGTAATTGTGATCGATGTAATGTTGAATCAAATTGGTCTGATAATGAGAGTGTTGAAGGAAATGTGGAGGAGGATGAAGAAGAGGATATGGCTATGGATGATGAAGAGGAGGAGGAGCAATGTGAAAATATGGAACCATCAGAAACTGACAATAACGATTTCCCACATGCTTATTTCTTTTTGAAATACATGTGTGATGGAACAAATTGCTGGGGAACTTTAGCTCCTCTACCACCACAGGGTGATACATTATCTAATGTCATGGAATGTAATGTCTGTGGGAAATTGAAGAGAGATGATGACGACTTGAATGTTGATGATAAAGGGCAAAGTGGAGAAGTTCACATGGAGGACTGA 1209 0.3945 MAVPSSVLKVEEILGRGRGIVASQPLKAGQIILTDSPILLYPTTPFSHHSSSFCDHCFKSLHSSFVSCSSCNRYRFCDSTCLSKALNSSHSTWVCQALSQLQSNPLLLQQPLERQLQARFLVAAYNLAITTPSNFQILLSLQGSPDNDEAANFLHPIIASLLSHPHNELFSLQLTSSLLAKDKLNAFGLMHPFSETDENRSVRAYGIYPYASFFNHDCLPNACRFDYVDVNPPYDVAAGLSNTDFVIRMIHDVPQGREICLSYFPVNENYSSRQKRLLEDYGFACNCDRCNVESNWSDNESVEGNVEEDEEEDMAMDDEEEEEQCENMEPSETDNNDFPHAYFFLKYMCDGTNCWGTLAPLPPQGDTLSNVMECNVCGKLKRDDDDLNVDDKGQSGEVHMED* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2660 402 Gene3D - 53 104 - -
Mtr8g2660 402 Gene3D - 109 186 - -
Mtr8g2660 402 MobiDBLite consensus disorder prediction 298 334 - -
Mtr8g2660 402 Gene3D SET domain 19 290 IPR046341 -
Mtr8g2660 402 CDD SET_SMYD 184 290 - -
Mtr8g2660 402 Pfam SET domain 17 263 IPR001214 GO:0005515
Mtr8g2660 402 SUPERFAMILY SET domain 4 285 IPR046341 -
Mtr8g2660 402 SMART set_7 6 270 IPR001214 GO:0005515
Mtr8g2660 402 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 3 391 IPR044238 -
Mtr8g2660 402 MobiDBLite consensus disorder prediction 302 330 - -
Mtr8g2660 402 ProSiteProfiles SET domain profile. 3 264 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2660 Mtr-Chr8 37225545 37228621 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr8g2660 SET 1.7e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2660 - - gmx:100783406 508.834