Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2636 ATGATTCTTGGAAGCCAGCCACAGTTAGTTGTTCTCTCTACTTGTATTTTCTTTCCTTCTTCTCCACAAATTCATCATATAAACAAAAAATCATTAAACAACGACATAGTTAGTTCAATGGATTGGGTACGAGGAGAAGCTGTTGGAAGAGGTAGTTTTGCAACTGTTAATTTAGTTATACCCAAAGGAAATTCATATTCAACTCCGACAGCCGTCAAAACATCCGAGGTTTCAACCTCGTCTTCACTCAAAAACGAGAAACATGTTCTTCATCAACTTGGTTCTTGTCAAAGAATTATTCCTTGTTTTGGAGATGATTACACTTTTGAGAATGGCAAAGAGTATTACAATTTATTCCTCGAATACGCTTCTGCGGGTGCTCTCTCCGATCAGGTGAAACTCAATGGTGGCCGGATACCGGAGCAACACATTCGTCGTTACACGAGGTCAATCGTTGAGGGACTTGATCACATTCATCGCAATGGATTTGTTCATTGTGATATAAAGCTTCAAAATATTTTGGTGTTCAATGATGGTGAAATCAAAATTGCTGATTTTGGTCTTGCCAAGAAAACAGGGGGAAAACAGAGTTTGAAATGCAGGGGAACTCCACTTTTTATGTCGCCGGAATCAGTAAACCACGGTGAGCATGAATCTCCGGCGGATATATGGGCACTTGGGTGTGCGGTGGTGGAGATGGTAACTGGAAAACCAGCATGGAATTTGGAGAAAGATTCAAATATGTGGTCATTGTTGCTTCGGATTGGTACCGGAGAAGAATCGCCGGTGATACCCGAAGAATTGTCAAAAGAAGGAAAAGATTTTGTTGAGAAGTGTTTTGTGAAAGATCCAAGAAAAAGATGGACGGCTGAGATGCTTTTGAATCATCCTTTTGTTGAAGAAGTGAAGAATGTTAATGAATCATCACCAAGAAATCACTTTGATTTCAATGATTGGGTTTCTAGTGCGACTGATTCGGTTCCGAATTCACCGGAATCGGAAGAATCAAGTCCATGGGATTTTGATTCCAAATTTTGCTCCGCGGCGGACCGGCTCTGGCAGCTTGTGACTGATGAACGGCTGGTGAGTTCGTCGGAATTAGATAGTTGGATTAGTGTTAGATGA 1125 0.4116 MILGSQPQLVVLSTCIFFPSSPQIHHINKKSLNNDIVSSMDWVRGEAVGRGSFATVNLVIPKGNSYSTPTAVKTSEVSTSSSLKNEKHVLHQLGSCQRIIPCFGDDYTFENGKEYYNLFLEYASAGALSDQVKLNGGRIPEQHIRRYTRSIVEGLDHIHRNGFVHCDIKLQNILVFNDGEIKIADFGLAKKTGGKQSLKCRGTPLFMSPESVNHGEHESPADIWALGCAVVEMVTGKPAWNLEKDSNMWSLLLRIGTGEESPVIPEELSKEGKDFVEKCFVKDPRKRWTAEMLLNHPFVEEVKNVNESSPRNHFDFNDWVSSATDSVPNSPESEESSPWDFDSKFCSAADRLWQLVTDERLVSSSELDSWISVR* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2636 374 SMART serkin_6 42 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2636 374 CDD STKc_MAPKKK 41 299 - -
Mtr8g2636 374 SUPERFAMILY Protein kinase-like (PK-like) 41 338 IPR011009 -
Mtr8g2636 374 ProSiteProfiles Protein kinase domain profile. 42 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2636 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Mtr8g2636 374 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 40 355 - -
Mtr8g2636 374 ProSitePatterns Protein kinases ATP-binding region signature. 48 73 IPR017441 GO:0005524
Mtr8g2636 374 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 40 355 - -
Mtr8g2636 374 Pfam Protein kinase domain 44 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2636 374 Gene3D Transferase(Phosphotransferase) domain 1 38 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2636 Mtr-Chr8 37020355 37021758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2636 40 374 MAP Kinase Kinase Kinase AT4G36950 53.179 4.34e-120 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mtr8g2636 Pkinase 3.7e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2636 - - aprc:113858661 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0640 5 6229216 6230575 Mtr8g2636 8 37020355 37021758 PCT