Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2634 ATGGATGTCGACATAGTGAAAACTGACGGAAGCATGGACATGATAGCAATGATGATGCAAATGGAAAAGTTCCCTGAATTCTCTGATCAACCTTTTTATAACACTTACCAAGAAATCACCAACAACACTGTTCCATTATTTAACCTGAACCAAAATGCACTATCATCTCCACAATCTTTGAATAATATTGATCCAGTTCTACACTCCAATGTCAATTTCCAACAACACTTGAATATCACACCACCACCTCTTCAAACTAACTCTTCATCATTTCCTTACTCGCAGTCGAATTCTTCTGAAAAGAAGAATTCGATGGCAGCGATGAGGGAAATGATATTTAGAATAGCAGTTATGCAACCTATACATATCGATCCGGAAGCCGTTAGGCCGCCGAAGAGAAGGAATGTGAAGATATCAAAGGATCCACAAAGTGTAGCTGCTAGGCATAGAAGAGAAAGGATAAGTGAGAGGATAAGGATATTGCAAAGATTAGTACCTGGTGGAACCAAAATGGACACTGCTTCAATGTTAGATGAAGCTATACATTATGTGAAGTTTTTGAAGAAACAAGTTCACACGTTGGAACAAGTAGGTGCTAATAATAGATCACAATCACACATTGGTGGTGGATTCATTGGAGGGAATAATATGATGAACAATTTTAATAATGTGAATTATAATTCTGGTTTGATGATGAAGGGTTGTCAACCTTTTCAAATGGTGGGTTCCACTTCCAAACAATTGCTTAGCTAG 753 0.3772 MDVDIVKTDGSMDMIAMMMQMEKFPEFSDQPFYNTYQEITNNTVPLFNLNQNALSSPQSLNNIDPVLHSNVNFQQHLNITPPPLQTNSSSFPYSQSNSSEKKNSMAAMREMIFRIAVMQPIHIDPEAVRPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQVGANNRSQSHIGGGFIGGNNMMNNFNNVNYNSGLMMKGCQPFQMVGSTSKQLLS* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2634 250 Gene3D - 137 207 IPR036638 GO:0046983
Mtr8g2634 250 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 142 199 IPR036638 GO:0046983
Mtr8g2634 250 Pfam Helix-loop-helix DNA-binding domain 147 187 IPR011598 GO:0046983
Mtr8g2634 250 PANTHER TRANSCRIPTION FACTOR HEC2 1 241 - -
Mtr8g2634 250 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 1 241 IPR045843 GO:0003700|GO:0006355
Mtr8g2634 250 SMART finulus 144 193 IPR011598 GO:0046983
Mtr8g2634 250 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 138 187 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2634 Mtr-Chr8 36983119 36984302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2634 17 213 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 57.843 2.56e-52 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr8g2634 HLH 1.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2634 - - gmx:100800816 256.144