Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr8g2634 | ATGGATGTCGACATAGTGAAAACTGACGGAAGCATGGACATGATAGCAATGATGATGCAAATGGAAAAGTTCCCTGAATTCTCTGATCAACCTTTTTATAACACTTACCAAGAAATCACCAACAACACTGTTCCATTATTTAACCTGAACCAAAATGCACTATCATCTCCACAATCTTTGAATAATATTGATCCAGTTCTACACTCCAATGTCAATTTCCAACAACACTTGAATATCACACCACCACCTCTTCAAACTAACTCTTCATCATTTCCTTACTCGCAGTCGAATTCTTCTGAAAAGAAGAATTCGATGGCAGCGATGAGGGAAATGATATTTAGAATAGCAGTTATGCAACCTATACATATCGATCCGGAAGCCGTTAGGCCGCCGAAGAGAAGGAATGTGAAGATATCAAAGGATCCACAAAGTGTAGCTGCTAGGCATAGAAGAGAAAGGATAAGTGAGAGGATAAGGATATTGCAAAGATTAGTACCTGGTGGAACCAAAATGGACACTGCTTCAATGTTAGATGAAGCTATACATTATGTGAAGTTTTTGAAGAAACAAGTTCACACGTTGGAACAAGTAGGTGCTAATAATAGATCACAATCACACATTGGTGGTGGATTCATTGGAGGGAATAATATGATGAACAATTTTAATAATGTGAATTATAATTCTGGTTTGATGATGAAGGGTTGTCAACCTTTTCAAATGGTGGGTTCCACTTCCAAACAATTGCTTAGCTAG | 753 | 0.3772 | MDVDIVKTDGSMDMIAMMMQMEKFPEFSDQPFYNTYQEITNNTVPLFNLNQNALSSPQSLNNIDPVLHSNVNFQQHLNITPPPLQTNSSSFPYSQSNSSEKKNSMAAMREMIFRIAVMQPIHIDPEAVRPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQVGANNRSQSHIGGGFIGGNNMMNNFNNVNYNSGLMMKGCQPFQMVGSTSKQLLS* | 251 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr8g2634 | 250 | Gene3D | - | 137 | 207 | IPR036638 | GO:0046983 | |
Mtr8g2634 | 250 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 142 | 199 | IPR036638 | GO:0046983 | |
Mtr8g2634 | 250 | Pfam | Helix-loop-helix DNA-binding domain | 147 | 187 | IPR011598 | GO:0046983 | |
Mtr8g2634 | 250 | PANTHER | TRANSCRIPTION FACTOR HEC2 | 1 | 241 | - | - | |
Mtr8g2634 | 250 | PANTHER | TRANSCRIPTION FACTOR HEC3-RELATED | 1 | 241 | IPR045843 | GO:0003700|GO:0006355 | |
Mtr8g2634 | 250 | SMART | finulus | 144 | 193 | IPR011598 | GO:0046983 | |
Mtr8g2634 | 250 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 138 | 187 | IPR011598 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr8g2634 | Mtr-Chr8 | 36983119 | 36984302 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr8g2634 | 17 | 213 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT3G50330 | 57.843 | 2.56e-52 | 168 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Mtr8g2634 | HLH | 1.5e-06 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr8g2634 | - | - | gmx:100800816 | 256.144 |