Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2626 ATGGTGGCGGTTGATGAAAAGAAGAGGGATCGAATGGTGAAAAAAGATGTGATGGAATTTCCTCGAAATGATGATCATGGAGTGACTGTTGCATTTTATGGGAGAGAGGTGTATGAGGGTGTTCCTATGGCACATTTCTCTCCAAAGTCTCCTTTAAATTATAAACAGAACAAGGCGGTGGAAAATAAATACAAGCTCTTGAATAGTCCAACAAAACAAGCAACACTAGATGAGACACAATCACAAAAGTTTGCAAGTTCAACTAAAGGGGCAACAGATGGAACATATTCTCGTGGTGAGGCGATATCATCTGCTGTGATTCACGCCGAAGGACTCCGATCACATTTGGAACCAGAGTTCCCTAGTTTTGTGAAGTCATTGGGGTTGCCTGTATCGTTTTGTAAAAGACATTTACCTGATAAAGATACAACTATCACATTAGAAGATGAATATGGTAAAGAATACAAAACAAAATACATTGCATGTAAGACAGGATTGAGTGCTGGTTGGAGACAGTTTTCTGCTGTGCATAAATTGCTAGAAGGAAGAAACAACATAGAATCTGATGTTGTAGCATGTAATAGCCCAAAAAGAAAAAGCATTAAACCTGTTTCACAAGACATCCAAAGGAAAAAGAAAATGATTGTATCAAACATGGAGTCTAAGCCTAAACAATATAGAGAGCAATCTGAAATTGATAGCGACGAAGCTTTGTCAGAAATATTCGAAGGATTTAAAATGCCTGAATTTAAAGAGTTAAAAGGTTTTGAAAATTTCAGAATCATAGTTGATGGAAGGCCAATTGAAGAAGAACTCTCCACAGAAGTTCGAAGCAAGTACTACAGACTATGTTACAGTCAACAAGTTTTTCTTCATGACAATGTCATCAAAGGCTTGCATTATAAGCTGATTGCTGGAATTATATCCGAAATTGTTAATATTGCTGATGCAATAAAAGTCAGTGTGATATCTACACCGCGTGTTGAATTTTCTAATTGGGATAAAACATTGCTAGCTTTTGAACATTTGGGCATGAATGTTGAATTTTTAAGAGTTCGGTTGCGCAGGCTTGTTAGCATAGCTTATGAAACTGGTGATGCCTCAGAGATTAGAAGATATATGGCCTATAGAACTGAACAACACGGTCAGGTAGAGGATGAAATAAAGAACATGGAAACGAAGCTTGAAGAATTGAAGGAAGCTTGTAGCGGCTTTACTAATTATCTCGAGAGTTTAAAGTCTAAAGCTGAAAAGCATGAACATAAGTTTCAGAAAGAAGTTGCTGCTAATTGGTGA 1296 0.3711 MVAVDEKKRDRMVKKDVMEFPRNDDHGVTVAFYGREVYEGVPMAHFSPKSPLNYKQNKAVENKYKLLNSPTKQATLDETQSQKFASSTKGATDGTYSRGEAISSAVIHAEGLRSHLEPEFPSFVKSLGLPVSFCKRHLPDKDTTITLEDEYGKEYKTKYIACKTGLSAGWRQFSAVHKLLEGRNNIESDVVACNSPKRKSIKPVSQDIQRKKKMIVSNMESKPKQYREQSEIDSDEALSEIFEGFKMPEFKELKGFENFRIIVDGRPIEEELSTEVRSKYYRLCYSQQVFLHDNVIKGLHYKLIAGIISEIVNIADAIKVSVISTPRVEFSNWDKTLLAFEHLGMNVEFLRVRLRRLVSIAYETGDASEIRRYMAYRTEQHGQVEDEIKNMETKLEELKEACSGFTNYLESLKSKAEKHEHKFQKEVAANW* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2626 431 SUPERFAMILY DNA-binding pseudobarrel domain 117 182 IPR015300 -
Mtr8g2626 431 Gene3D - 107 186 IPR015300 -
Mtr8g2626 431 Coils Coil 381 415 - -
Mtr8g2626 431 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 17 182 IPR044837 -
Mtr8g2626 431 CDD B3_DNA 121 182 IPR003340 GO:0003677
Mtr8g2626 431 MobiDBLite consensus disorder prediction 76 96 - -
Mtr8g2626 431 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS01G0234100-LIKE 17 182 - -
Mtr8g2626 431 SMART B3_2 123 196 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2626 95 182 B3 DNA Binding Superfamily AT3G19184 41.414 1.32e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2626 - - gmx:100819237 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2626 8 36879328 36881974 Mtr8g2626 8 36879328 36881974 ECH