Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2606 ATGGGTCTCTGCACTTCAAAACCACTCTCTTCACCCAATTCTGAAACCACTATTCACATTCAATCACAACCAGAACAACCCTCTTCCACCAATGTAGTAGAAATTCAAAACCCTAAAAAATCACCTTTTCTCCCCTTTTACACACCAAGTCCAGCTCACAATTTATTCTCCGGCAAAACTCCGGCGACACCAAGAACTCCGAGGAGATTCTTCCGACCACCATCGCCGGCGAAGCACATTAGGTCACTTCTAGCTCGCCGTCACGGCTCCGTAAAGCCGAACGGTGCAGCTAGTATTTCAGAAGGAAGTGAAGGTGAAAGTGTTGCTCCACTTGATAAGAATTTTGGGTTTTCGAAGCATTTTGGTAGTAAGTATCAGCTTGGTGAAGAAGTTGGTAGAGGACATTTTGGTTATACTTGTTCTGCTATTGTTAAGGTTAATTATAAGGGTGAGATTAAGGGTCATCGTGTTGCTGTTAAGGTTATTCAGAAAGTTAAGATGACTACTGCTATTGCTATTGAGGATGTTAGAAGGGAAGTGAAGATCTTGAGAGCTTTGAATGGACACAAGAATTTGATTAAATTTTATGAGGCTTATGAAGATCATGATAATGTCTATATAGTCATGGAGTTGTGTGAAGGAGGGGAGCTTTTGGACAGAATACTATCGAGAGGTGGGAAATACTCGGAGGAAGATGCAAAAGTTGTCATGACACAAATACTGAATGTTGTTGCATTTTGCCATTTACAAGGTGTTGTTCATCGAGATCTTAAACCTGAGAACTTCTTGTTTTCAACCAAAGATGAGAACTCAGAGCTGAAGGCCATTGACTTTGGTTTGTCGGATTTTGTTAAACCGGATGAACGGCTTAATGATATCGTTGGTAGTGCATACTATGTGGCTCCCGAGGTTTTGCATAGAGCTTACAGCACAGAGGCTGACGTATGGAGTATTGGTGTGATCGCATATATTTTATTATGTGGAAGTCGTCCATTTTGGGCACGAACTGAATCTGGGATCTTTCGTTCCGTATTGAAAGCAGATCCAAGTTTTGATGAACCTCCTTGGCCTTCTTTGTCAGATGAGGCACAAGATTTTGTTAAGCGATTACTAAATAAAGATCCAAGGAAGAGAATGACAGCAGCACAGGCATTGGGTCATCCATGGATTAAAAGTTACAAGATTGTAAAAGTACCGTTGGATATTCTAGTGTTCAAGCTCATGAAGGCATACATGCGTTCCTCCTCTCTAAGAAAAGCAGCTTTAAGGGCTCTGTCTAAGACAGTAGCTGCTGATGAGCTGAATTATTTGAAGGAGCAATTCGCACTTCTAGAACCAAACAAAAATGGCACCATTAACTTGGAAAATATAAAAGCGGTCTTGATGAAGAATGCAACGGATGCTATGAAGGAGTCACGAATTCCTGATCTTGTGGCATCACTTAATGCCTTGCAATATAGAAGGATGGATTTTGATGAGTTCTGTACAGCTGCACTTAGTGTTCATCAACTCGAAGCACTTGACAGGTGGGAGCAACATGCACGCTGTGCCTATGAAATTTTTGAAAAGGATGGAAACAGAGCTATAATGATTGAGGAACTAGCTTCGGAGCTTGGCCTTGGTCCATCTGTACCTGTTCATGCCGTTCTTCATGACTGGATTAGGCACACCGATGGAAAGTTAAGCTTCCTTGGATTTGTTAAGTTGCTGCACGGTCCATCTCGAAGTCTTGTAAAACCTCAATAA 1746 0.417 MGLCTSKPLSSPNSETTIHIQSQPEQPSSTNVVEIQNPKKSPFLPFYTPSPAHNLFSGKTPATPRTPRRFFRPPSPAKHIRSLLARRHGSVKPNGAASISEGSEGESVAPLDKNFGFSKHFGSKYQLGEEVGRGHFGYTCSAIVKVNYKGEIKGHRVAVKVIQKVKMTTAIAIEDVRREVKILRALNGHKNLIKFYEAYEDHDNVYIVMELCEGGELLDRILSRGGKYSEEDAKVVMTQILNVVAFCHLQGVVHRDLKPENFLFSTKDENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRSVLKADPSFDEPPWPSLSDEAQDFVKRLLNKDPRKRMTAAQALGHPWIKSYKIVKVPLDILVFKLMKAYMRSSSLRKAALRALSKTVAADELNYLKEQFALLEPNKNGTINLENIKAVLMKNATDAMKESRIPDLVASLNALQYRRMDFDEFCTAALSVHQLEALDRWEQHARCAYEIFEKDGNRAIMIEELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLVKPQ* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2606 581 ProSiteProfiles EF-hand calcium-binding domain profile. 432 467 IPR002048 GO:0005509
Mtr8g2606 581 SUPERFAMILY Protein kinase-like (PK-like) 122 417 IPR011009 -
Mtr8g2606 581 ProSiteProfiles Protein kinase domain profile. 125 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2606 581 SUPERFAMILY EF-hand 418 572 IPR011992 -
Mtr8g2606 581 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 35 576 - -
Mtr8g2606 581 MobiDBLite consensus disorder prediction 55 75 - -
Mtr8g2606 581 Gene3D Phosphorylase Kinase; domain 1 118 217 - -
Mtr8g2606 581 Gene3D - 413 572 - -
Mtr8g2606 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Mtr8g2606 581 MobiDBLite consensus disorder prediction 1 36 - -
Mtr8g2606 581 ProSitePatterns Protein kinases ATP-binding region signature. 131 160 IPR017441 GO:0005524
Mtr8g2606 581 Gene3D Transferase(Phosphotransferase) domain 1 218 412 - -
Mtr8g2606 581 PANTHER SERINE/THREONINE-PROTEIN KINASE 35 576 - -
Mtr8g2606 581 SMART serkin_6 125 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2606 581 CDD STKc_CAMK 124 389 - -
Mtr8g2606 581 Pfam Protein kinase domain 125 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2606 Mtr-Chr8 36585081 36589260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2606 1 579 EF-hand Containing Proteins AT3G50530 71.003 0.0 899
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mtr8g2606 Pkinase 7.4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2606 K00924 - gmx:100803313 925.62