Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2603 ATGACAGGCATTCAACTTATCTCGACTAGTGCAATCCAAGCAAGAAATCATGGTGGTGACAAATCAACTCACAAAATTATCCATTTAACTCCATGGGATCTAGGATTACTCAAAATAGATCCAATCCAACAAGGCCTTCTTTTCCATAAACCTAAAACCAACCAAATCCAACATCTTAAACAAACACTTTCCTCCACTCTCCATTTCTTTCCACCCCTCGTTGGTCGTCTTGTAATATCTCAACACGATGAACATAACAATGCCTCATGTTCCATCATTTGCAACAATGCTGGTGCGTTGTTTGTCCATGCCATAGCAGAAAACACAACCATTGCTCACATCCTTCGACCCAACTATGTTCCTCCCATTGTTCACTCATTATTTCATCTCAACGGAGTTAAAAACTACAAAGGTACATCACAACCATTGCTTGCAGTTCAAGTAACAGAGTTAATTGATGGTATCTTCATTGGTATTGAAATGAACCATGTGGTTGTAGATGCCAAGTCGTTTTGGCATTTCGTCAATTCTTGGGTTGAAATCTCACATGGTTTCAATAAACCAACAAAAATCCCTTCTTTCGAACGTTTCTTTCCAAACAACATTAACCATCATCCCATACGGTTTCCTTTCACAAAGGAAACACAAAGTCAACAATTTGAAGTATCACATCCTCATCGAATCTTCCACTTCACAAAGGAACAAATTCTGCAACTCAAATCAAAAGCTAATGCAGAAATTAGTAGTAGTTGCGGTGGTGATAAAATAATAATATCTTCATTGCAAGCACTTTTAAGCCACTTTTGGCGTTTAACTATAAGTAAACAAAATCTTAAACCAGAAGAAAATACCATTTTCAGGTTACCAATAGATTGTAGGACAAGAATGTGTCCAAAGTTAGCAGAGAATTATTTTGGTAACGCGATCGGAGTGTATGGAGATGTAATCATGAAAGTAGGGGAATTGATTAAGGAAGGTGGTATTGGTAAGGCTGCTATGGAAATGAACAAGATGATTTCTAAGGAATCTCATCATGAGAAGGTAATGAATAACTACGAGTCTTGGTTGAAAACACCGATTATAGGAGAGGCAGGTATGTTAAGAAGTAGTAATGTGTATTTAGTAAGTAATTCCCCAAGATTTGATTTTTATGGTAATGACTTTGGTTGGGGTAAGCCAATTGCAGTTAGGAATGGGGTTGGACTTCAAAAAAATATCGGTAAAGTTACTATATTTTGTGGGGCGGAAGAAGGTAGTATTGATATTCAAGTTTGTCTTCCTTATGATATTTTGGAGGCTATTGGAAATTTTCATATGTCCATGAAAAACTAG 1332 0.3686 MTGIQLISTSAIQARNHGGDKSTHKIIHLTPWDLGLLKIDPIQQGLLFHKPKTNQIQHLKQTLSSTLHFFPPLVGRLVISQHDEHNNASCSIICNNAGALFVHAIAENTTIAHILRPNYVPPIVHSLFHLNGVKNYKGTSQPLLAVQVTELIDGIFIGIEMNHVVVDAKSFWHFVNSWVEISHGFNKPTKIPSFERFFPNNINHHPIRFPFTKETQSQQFEVSHPHRIFHFTKEQILQLKSKANAEISSSCGGDKIIISSLQALLSHFWRLTISKQNLKPEENTIFRLPIDCRTRMCPKLAENYFGNAIGVYGDVIMKVGELIKEGGIGKAAMEMNKMISKESHHEKVMNNYESWLKTPIIGEAGMLRSSNVYLVSNSPRFDFYGNDFGWGKPIAVRNGVGLQKNIGKVTIFCGAEEGSIDIQVCLPYDILEAIGNFHMSMKN* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2603 443 Pfam Transferase family 21 434 - -
Mtr8g2603 443 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 4 442 - -
Mtr8g2603 443 Gene3D - 2 207 IPR023213 -
Mtr8g2603 443 Gene3D - 224 440 IPR023213 -
Mtr8g2603 443 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 4 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2603 Mtr-Chr8 36558970 36560330 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2603 57 426 Monolignol Biosynthesis Gene Families AT5G48930 24.745 1.64e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2603 - - mtr:MTR_4g094828 658.677