Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2597 ATGGATCGAGCTGCTATGACGGTCGGACCGGGTATGGATTTACCGATCATGCACGACAGTGATCGGTACGATCTGGTTCGTGATATCGGGTCCGGAAATTTCGGTATTGCTAGGTTGATGCAAGATAAACAAACCAAAGAGCTTGTTGCTGTTAAATATATCGAACGTGGTGATAAGATTGATGAAAATGTGAAGAGAGAAATTATTAATCACAGGTCTCTGAGACATCCTAACATTGTTAGGTTTAAGGAGGTCATTTTAACACCTACTCATCTTGCTATTGTAATGGAGTATGCATCTGGAGGAGAACTTTTTGAGCGAATCAGTAATGCTGGCCATTTTTCTGAGGACGAGGCTCGTTTCTTCTTTCAACAGCTCATATCTGGGGTCAGCTACTGTCATGCAATGCAAGTATGTCACCGGGACCTGAAATTGGAAAATACTTTGTTGGATGGAAGCCCGACTCCTCGACTGAAGATATGTGATTTTGGTTACTCCAAGTCTTCAGTGCTTCATTCACAACCAAAGTCAACTGTGGGAACTCCGGCATATATTGCTCCAGAAGTATTACTGAGACAAGAGTACGATGGAAAGATCGCAGATGTTTGGTCTTGTGGGGTAACCTTATATGTGATGCTAGTGGGATCGTATCCCTTTGAAGATCCTAACGAGCCAAAAGATTTCCGGAAGACAATACAGAGAGTACTCAGTGTCCAGTATTCCATTCCAGACAATGTTCAGATAACTCCAGAGTGTCGCCACCTTATCTCAAGGATCTTTGTTTTTGACCCTGCAGAGAGAATTACCATGCCTGAAATCTGGAAACATAAATGGTTTCTGAAGAATCTTCCCATGGACCTGATGGATGAGAAGATAATGGGTAACCAATTTGAAGAGCCTGAACAGCCCATGCAGAGCATTGATACAATCATGCAGATAATTTCAGAAGCTACTATACCTGCAGCTGGAACCTGTTCTTTAGACCAGTTTATGGCAGATAACCTTGATATGGACGATGAATTTGATGACTTGGAATATGAATCCGAGCTTGATATAGATAGCAGTGGGGAGATAGTGTATGCCATGTACTAA 1092 0.4231 MDRAAMTVGPGMDLPIMHDSDRYDLVRDIGSGNFGIARLMQDKQTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERISNAGHFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPTPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGSYPFEDPNEPKDFRKTIQRVLSVQYSIPDNVQITPECRHLISRIFVFDPAERITMPEIWKHKWFLKNLPMDLMDEKIMGNQFEEPEQPMQSIDTIMQIISEATIPAAGTCSLDQFMADNLDMDDEFDDLEYESELDIDSSGEIVYAMY* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2597 363 SUPERFAMILY Protein kinase-like (PK-like) 15 314 IPR011009 -
Mtr8g2597 363 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Mtr8g2597 363 PANTHER SERINE/THREONINE KINASE 14 357 - -
Mtr8g2597 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Mtr8g2597 363 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2597 363 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 14 357 - -
Mtr8g2597 363 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2597 363 Gene3D Transferase(Phosphotransferase) domain 1 99 286 - -
Mtr8g2597 363 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2597 363 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2597 Mtr-Chr8 36510669 36515629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2597 22 283 CBL-interacting serine-threonine protein kinases AT5G25110 43.431 6.62e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Mtr8g2597 Pkinase 1.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2597 K14498 - gmx:100806949 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2597 8 36510669 36515629 Mtr5g0685 5 6715997 6720750 PCT