Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2565 ATGTTCCATCATCATCTTCATCACAAGTCAAAGCTTCTTTCTATTTTCATCATCTTCATCACAATCTTCATAACAGTAACAACTGCTGAACAAAACAAAACTGACTGTGTTCAAAGATGTGGAAAACAATCTGTTAAGTATCCATTTGGATTTTCCGAAGGTTGTAAAATCAAACTAAACTGCAGCATCAATAAAGAACTCAAGATTGGTGAACTGAAAGTTCAAGAAGTGAATTCTGATAGTATATTCATATCTTTACCAGCAAAATGTAACCGTAGCATAAGTTTCATAAACCAACTTTTCGACAAAAACTATGCTCCAACATGGAACAACACGTTCCTCGTACAAGATTGTAGTGCTTCAAACTACAGTGGTTGTGTTATTCCAGCTTCGAGTTTCGTTGGAAAACAGATAGAAGGTTGTGATGGTTCAAGAAGAAGTGATAATATCAATTGTTTCACGCAGTTGCAGCGTCGAAGACCGCGTGAAGATGTTCTTGCTCTTGAAGATTGGAAGAAAATTGAATGCAATTTTTTGTTTTCTGCCATTGCTTTTGATAACAGTAAAGTCAACGAGGCTCCACTTCAGTTTCAGGTTGTTGAGTTAGGATGGTGGCTAGAAGGTTCTTGTCCACGATGTTCTCGAGATGCTAACTGTACAGAGGTTCATCTTGCCGAAGGAAAACAAGGTTTCCGGTGTCGCTGCCACAAAGGTTTCGTCGGAGATGGATTTGTCAACGGTTCTCGTTGCCGGAGAGTTTCACGTTGCAGTCCTTCAACACTTGGGTCTAGCAAATGTGGAAAGGCACTCAGAATTGGTGTACTTCTTGGAGTGATCACAGTTGGAGCCTCCATAACAGCTGTACTGTCTCTACTATGCTACTTCGCCAAACGTCGTTCGTCATGGCTGACAAAACAATTGACGGTAAAGCGTCTATTAAGAGAAGCTGCAGGCAACTACATTGTTCCTCTCTATCCCTACAAAGAAATAGAGAAAGCCACAAATTTTTTCTCGGAAAAACACAGGTTAGGAACCGGTGCTTATGGCACGGTTTACGCCGGAAACCTTCACAGTGATGAATTGGTTGCTATAAAAAAAATCAGGTATAGAGACACCAACAGTGTTGACCAAGTTATGAATGAAATCAAGCTCCTTTCTTCGGTTAGTCACCCGAATTTAGTACGCCTTTTAGGTTGTTGCATAGAAAAAGGAGAGCATATACTTGTTTATGAGTATATGCCAAATGGAACACTATCGCAACATTTACAAAGAGAAAGAGGTGGAGTACTTCCTTGGACAATAAGACTCACCATTGCCTCTGAAACTGCTAATGCTATAGCATTTCTCCATTCTTCAAATCCTCCAATTTATCATAGAGACATAAAATCTAGTAATATACTTTTGGACTTTAGCTTTCATTCGAAAGTAGCAGATTTCGGACTTTCCAGACTTGGCATGACAGAAACATCACATATCTCAACCGCGCCTCAAGGGACTCCGGGTTATGTTGATCCACAATATCACCAAAACTTTCATCTTTCTGATAAAAGTGATGTCTATAGTTTCGGAGTTGTTTTGGTAGAGATAATAACAGCAATGAAAGTGGTTGATTTTGGTAGACCTCAGAGTGAGATTAATTTGGCAGCACTTGCTGTTGAAAAGATTAGAAAAGGTCGTATTGACGACATCATAGATCCTTTCCTTGATCTAAATAGGGATGCTTGGACACTCTATTCTGTTCAAAAGGTAGCTGAGCTTGCATTTAGATGCCTCGCTTTTCATAGCGACGTGAGGCCTAGTATGATTGAGGTTGCTGAGGAGCTAGATCATATCAGACGTAGCGGATGGGCAACGATGGAGGAAACTATATGCATGGGATCATCGGTTGGATCCGCATGCTCATCGCCTCGTAGTAATAGAAATGAGAATCTAGTCTCACAGAATGAGATATTGGTTGTTCCACAAAAGACTAATAGTTTTTTGCAATCAATAGAGGAGGTGAAGGATAGTTCCCCTGTATCTGTTCATGGTACTTGGTCAAGTAGACCTAGCTCACCTTCAACAAACAGTTTGCTGGGAAACGTTGTTCAGTGA 2094 0.4031 MFHHHLHHKSKLLSIFIIFITIFITVTTAEQNKTDCVQRCGKQSVKYPFGFSEGCKIKLNCSINKELKIGELKVQEVNSDSIFISLPAKCNRSISFINQLFDKNYAPTWNNTFLVQDCSASNYSGCVIPASSFVGKQIEGCDGSRRSDNINCFTQLQRRRPREDVLALEDWKKIECNFLFSAIAFDNSKVNEAPLQFQVVELGWWLEGSCPRCSRDANCTEVHLAEGKQGFRCRCHKGFVGDGFVNGSRCRRVSRCSPSTLGSSKCGKALRIGVLLGVITVGASITAVLSLLCYFAKRRSSWLTKQLTVKRLLREAAGNYIVPLYPYKEIEKATNFFSEKHRLGTGAYGTVYAGNLHSDELVAIKKIRYRDTNSVDQVMNEIKLLSSVSHPNLVRLLGCCIEKGEHILVYEYMPNGTLSQHLQRERGGVLPWTIRLTIASETANAIAFLHSSNPPIYHRDIKSSNILLDFSFHSKVADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFGRPQSEINLAALAVEKIRKGRIDDIIDPFLDLNRDAWTLYSVQKVAELAFRCLAFHSDVRPSMIEVAEELDHIRRSGWATMEETICMGSSVGSACSSPRSNRNENLVSQNEILVVPQKTNSFLQSIEEVKDSSPVSVHGTWSSRPSSPSTNSLLGNVVQ* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2565 697 MobiDBLite consensus disorder prediction 672 697 - -
Mtr8g2565 697 CDD STKc_IRAK 343 611 - -
Mtr8g2565 697 SMART serkin_6 337 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2565 697 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 20 674 - -
Mtr8g2565 697 Gene3D Phosphorylase Kinase; domain 1 299 412 - -
Mtr8g2565 697 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 674 IPR045274 GO:0007166
Mtr8g2565 697 ProSitePatterns Protein kinases ATP-binding region signature. 343 366 IPR017441 GO:0005524
Mtr8g2565 697 ProSiteProfiles Protein kinase domain profile. 337 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2565 697 Gene3D Transferase(Phosphotransferase) domain 1 413 625 - -
Mtr8g2565 697 Gene3D Laminin 211 245 - -
Mtr8g2565 697 SUPERFAMILY Protein kinase-like (PK-like) 319 608 IPR011009 -
Mtr8g2565 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Mtr8g2565 697 Pfam Protein kinase domain 338 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2565 Mtr-Chr8 36115971 36120608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2565 6 695 Receptor kinase-like Gene Family AT2G23450 54.416 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mtr8g2565 Pkinase 1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2565 - - lja:Lj4g3v0867570.1 1015.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0710 5 6939192 6944162 Mtr8g2565 8 36115971 36120608 PCT