Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2545 ATGGTTTCTTCCTTTTTTCATACACTCATATTCTTTTCTGCCACCCATATCCTACTTCAATTGCCACAAGCCAATGGAAAAAACTTCTCATGTACTTTGAATTCCTCTCCTTCATGTGACACATATGTTGCATACTTTGCTAACTCTCCAAACTTTTTAACCCTCACAGCCATATCTGATATATTTGACACCAGTCCTCAATCCATTGCAAGAGCAAGCAACATAAAAGATGAAAATATGAACCTCATTCATGGCCAACTTTTGCTTATACCTATAACTTGTGGTTGCAATGGAAATGGAAACTACTCTTTTGCCAATATCTCACACTTAATCAAAGAAAGTGAAAGTTACTATTATCTTTCGACCATTTCGTATCAGAATCTCACTAATTGGCAGACAGTGGAAGATTCAAACCCTAATCTGAATCCATATTTGTTGAAAATAGGCACCAAAATAAACATCCCTTTGTTTTGTAGGTGCCCTTCAAACTATTTTGCAAAAGGGATAGAGTATCTCATTACTTATGTTTGGCAGCCTAATGATAATCTTACACTTGTAGCTTCCAAGCTTGGTGCATCACCAAAGGACATAATCACAGCAAATACAAACAACTTTGGTCAAAACTTCACTGTTGCAATCAACCTTCCAGTTTTTATTCCTGTGAAAAACTTACCAGCTCTTTCTCAATCATACTATTCTTCAAGTGAAAGAAAGAGAATCAATCATTTTTCTATTATAATTTCCATTGGTATATGTCTAGGATGCACTATTCTGATTTCACTATTATTATTACTTTTTTATGTTTATTGTTTAAGGAAGAGAAAGGCTTGTGAGAATAAGTGTGTGCCTTCTGTGGAGATAACAGATAAGTTAATTTCCGAAGTTTCAAATTATGTAAGTAAGCCAACAGTGTATGAAGTTGGTATGATTATGAAAGCTACCATGAACCTTAATGAAATGTGTAAGATAGGGAAATCAGTGTACAAAGCTAAAATAGATGGTTTGGTTTTGGCTGTGAAAAATGTAAAGGGACATATCACAGTCACAGAAGAGTTGATGATTTTACAAAAGGTAAATCATGCAAATCTAGTGAAACTAGTAGGTGTCTCTTCAGGATATGATGGAAATCACTTTCTTGTATATGAATATGCTGAAAATGGATCTCTTTATAACTGGTTATTATCTGAGTTTTGCACTCTTAGTTGGAGTCAGAGGTTAAGCATAGCAGTTGATATTGCAATAGGGCTGCAATACTTGCATGAACACACACAACCATGTATAGTCCATAGGAACATCAAATCAAGTAACATTCTTCTTGACTCAAAATTTAAGGCCAAGATAGCAAATTTTTCTGTTGCAAGAACTACAAAGAATCCTATGATAACAAAAGTTGATGTTTTAGGTTATGGAATGGTTCTGATGGAGCTAATAACAGGAAAGAAGTTTTTGTCGTATAGCGAACATAGCGAGGTGAATATGTTGTGGAAAGATTTTAAGTGTGTGTTTGATACAGAACAAAAGAGAGAAGAAATTGTTAGAAGATGGATGGATCCTAAGTTAGGGAGGTTTTATAATGTTGTTGAAGCTCTTAGTTTATTCACTTTGGCAGTGAATTGCATAGAAGAACAACCTTTGTTAAGACCAACTATGGGAGAAGTTGTTCTTAGTCTTTCTCTTCTCACTCAACCCTCTCCTACTTTGTTAGAGGTGTCTTGGACTTATGGATTAGATGTAGAGGTTGCTGAAATGGTTACTCCCATCATAGCTCGTTGA 1773 0.3508 MVSSFFHTLIFFSATHILLQLPQANGKNFSCTLNSSPSCDTYVAYFANSPNFLTLTAISDIFDTSPQSIARASNIKDENMNLIHGQLLLIPITCGCNGNGNYSFANISHLIKESESYYYLSTISYQNLTNWQTVEDSNPNLNPYLLKIGTKINIPLFCRCPSNYFAKGIEYLITYVWQPNDNLTLVASKLGASPKDIITANTNNFGQNFTVAINLPVFIPVKNLPALSQSYYSSSERKRINHFSIIISIGICLGCTILISLLLLLFYVYCLRKRKACENKCVPSVEITDKLISEVSNYVSKPTVYEVGMIMKATMNLNEMCKIGKSVYKAKIDGLVLAVKNVKGHITVTEELMILQKVNHANLVKLVGVSSGYDGNHFLVYEYAENGSLYNWLLSEFCTLSWSQRLSIAVDIAIGLQYLHEHTQPCIVHRNIKSSNILLDSKFKAKIANFSVARTTKNPMITKVDVLGYGMVLMELITGKKFLSYSEHSEVNMLWKDFKCVFDTEQKREEIVRRWMDPKLGRFYNVVEALSLFTLAVNCIEEQPLLRPTMGEVVLSLSLLTQPSPTLLEVSWTYGLDVEVAEMVTPIIAR* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2545 590 Pfam Protein tyrosine and serine/threonine kinase 339 457 IPR001245 GO:0004672|GO:0006468
Mtr8g2545 590 Gene3D Transferase(Phosphotransferase) domain 1 384 459 - -
Mtr8g2545 590 Gene3D Transferase(Phosphotransferase) domain 1 460 565 - -
Mtr8g2545 590 Gene3D Phosphorylase Kinase; domain 1 289 383 - -
Mtr8g2545 590 SUPERFAMILY Protein kinase-like (PK-like) 301 557 IPR011009 -
Mtr8g2545 590 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 9 590 - -
Mtr8g2545 590 Pfam LysM domain 120 155 IPR018392 -
Mtr8g2545 590 Pfam LysM domain 54 91 IPR018392 -
Mtr8g2545 590 PANTHER SERINE/THREONINE RECEPTOR-LIKE KINASE NFP 9 590 - -
Mtr8g2545 590 CDD LysM 107 154 IPR018392 -
Mtr8g2545 590 ProSiteProfiles Protein kinase domain profile. 296 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2545 Mtr-Chr8 35846271 35848043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2545 73 560 Receptor kinase-like Gene Family AT3G21630 31.181 3.28e-63 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mtr8g2545 PK_Tyr_Ser-Thr 2.6e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2545 - - vra:106777834 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2545 8 35846271 35848043 Mtr8g2545 8 35846271 35848043 ECH