LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr8g2532	ATGGGGACTAAGGAGGATAGCACAACTAAACCTTCTAAAACATCTTCATCAACTCAGGAAGTACCAACACCAACAGTACAACCATCATATCCAGATTGGTCAACCTCCATGCAGGCCTACTATAATCCTGGAGCCGCTCCGCCTCCCTATTATGCCTCAACTGTGGCTTCACCAACCCCGCATCCTTATATGTGGGGAGGCCAGCATCCTATGATGGCACCATACGGGACTCCAGTTCCGTATCCTGCAATGTTCCCTCCTGGGAATATCTATGCTCATCCTAGCATGACTCCAAGTGCTATGCACCAAACTACAGAGTTTGAAGGGAAGGGACCTGATGGAAAGGATAAGGATTCATCTAAAAAACCGAAGGGCACTTCTGCAAATACAAGCGCCAAAGCAGGAGAGGGTGGAAAGGCAGGATCAGGTTCAGGCAATGATGGCTTTTCACATAGTGGTGACAGTGGTTCAGAGGGTTCATCTAATGCTAGCGATGAAAACCAACAGGAATCAGCTAGAAACAAGAAGGGAAGCTTTGACCTCATGCTTGTTGATGGAGCCAACGCGCAGAACAATACTACTGGACCCATTTCTCAATCATCTGTTCCTGGAAATCCTGTTGTCTCGATACCTGCAACTAATCTTAATATTGGAATGGACTTATGGAATGCATCTTCTGCTGGTGCTGAAGCCGCCAAAATGAGACACAATCAACCTGGTGCTCCTGGAGCTGGTGCACTTGGTGAACAGTGGATGCAACAAGATGATCGTGAGTTGAAAAGACAGAAGAGAAAACAGTCTAATCGAGAGTCAGCCAGGAGGTCAAGACTACGCAAGCAGGCCGAGTGTGAAGAACTACAAAAGAGGGTGGAGGCGCTGGGAGGTGAGAATCGAACTCTCAGAGAAGAGCTTCAGAAACTTTCTGAAGAGTGTGAGAAGCTTACATCTGAAAACGATTCTATTAAGGAAGACTTGGAACGGTTGTGTGGGCCTGAAGTAGTTGCTAACCTTGAATGA	1017	0.47	MGTKEDSTTKPSKTSSSTQEVPTPTVQPSYPDWSTSMQAYYNPGAAPPPYYASTVASPTPHPYMWGGQHPMMAPYGTPVPYPAMFPPGNIYAHPSMTPSAMHQTTEFEGKGPDGKDKDSSKKPKGTSANTSAKAGEGGKAGSGSGNDGFSHSGDSGSEGSSNASDENQQESARNKKGSFDLMLVDGANAQNNTTGPISQSSVPGNPVVSIPATNLNIGMDLWNASSAGAEAAKMRHNQPGAPGAGALGEQWMQQDDRELKRQKRKQSNRESARRSRLRKQAECEELQKRVEALGGENRTLREELQKLSEECEKLTSENDSIKEDLERLCGPEVVANLE*	339

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr8g2532	338	Pfam	G-box binding protein MFMR	1	96	IPR012900	-
	Mtr8g2532	338	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	258	321	IPR004827	GO:0003700\|GO:0006355
	Mtr8g2532	338	CDD	bZIP_plant_GBF1	261	311	IPR045314	GO:0003700\|GO:0006355
	Mtr8g2532	338	Gene3D	-	259	315	-	-
	Mtr8g2532	338	PANTHER	G-BOX-BINDING FACTOR 1	1	338	-	-
	Mtr8g2532	338	Pfam	bZIP transcription factor	257	318	IPR004827	GO:0003700\|GO:0006355
	Mtr8g2532	338	SUPERFAMILY	Leucine zipper domain	259	315	IPR046347	GO:0003700\|GO:0006355
	Mtr8g2532	338	MobiDBLite	consensus disorder prediction	185	210	-	-
	Mtr8g2532	338	Coils	Coil	269	324	-	-
	Mtr8g2532	338	MobiDBLite	consensus disorder prediction	95	210	-	-
	Mtr8g2532	338	SMART	brlzneu	256	320	IPR004827	GO:0003700\|GO:0006355
	Mtr8g2532	338	MobiDBLite	consensus disorder prediction	108	123	-	-
	Mtr8g2532	338	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	263	278	IPR004827	GO:0003700\|GO:0006355
	Mtr8g2532	338	PANTHER	G-BOX-BINDING FACTOR 3-RELATED	1	338	IPR044827	GO:0003700\|GO:0006355\|GO:0043565
	Mtr8g2532	338	MobiDBLite	consensus disorder prediction	1	31	-	-
	Mtr8g2532	338	MobiDBLite	consensus disorder prediction	145	168	-	-
	Mtr8g2532	338	MobiDBLite	consensus disorder prediction	228	281	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr8g2532	1	338	bZIP Transcription Factor Family	AT4G36730	53.801	1.47e-104	307

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Mtr8g2532		MFMR	2.8e-30	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr8g2532	K09060		-	gmx:778191	487.648

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr8g2532	8	35678480	35684013	Mtr8g2532	8	35678480	35684013	ECH