Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2526 ATGGACCATGTTGTTAGGGTTCAACAAAACCCTAATGGAGCAAGTGGTGTTTGGGGTGCACCACACCCTCTAATGAATAGTGGTGAAATGAGTTCTAATTACTCCTATGGAATGGGACCACCAGGTTCTATGCAATCTTCTCCAGGACTATCTCTTACTCTTAAGGGTGGTACCTTTACTTATGAAGAATTGGCATCTGCTACTAAAGGTTTTGCTAATGAGAATATTATAGGACAAGGTGGTTTTGGTTATGTTCATAAGGGAATTTTGCCTACTGGAAAGGAAATTGCTGTTAAAAGTTTAAAAGCGGGTAGTGGACAAGGCGAACGTGAGTTTCAAGCTGAGATTGATATCATTAGTCGTGTTCATCATCGTCATCTTGTGTCGCTTGTTGGATATTGTGTTTCTGGTGGACAGAGAATGTTGGTTTATGAATTTGTTCCAAATAAAACTTTGGAATATCACCTTCATGGAAAGGGTGTGCCTACCATGGATTGGCCTACTAGAATGAGAATTGCATTAGGATCTGCTAGAGGACTTGCTTACCTTCATGAAGATTGTAGTCCTCGCATTATCCACCGTGATATTAAGGCTGCTAATGTTCTAATTGATGATAGCTTCGAAGCTAAGGTGGCTGATTTTGGATTGGCTAAGTTGACTACCGATACTAATACACATGTCTCAACTCGTGTCATGGGAACATTCGGGTATATGGCCCCAGAATATGCATCAAGTGGAAAATTGACAGAGAAATCTGATGTTTTTTCATTTGGGGTTATGCTATTAGAACTCTTAACTGGAAAAAGACCTTTGGATTTAACCAATGCCATGGACGAAAGCTTAGTTGATTGGGCTCGACCACTTTTGAGTCGTGCATTGGAGGAGGATGGAAACTTTGCAGAATTGGTGGATCCATTTTTGGAAGGAAATTACGATCATCAAGAAATGATAAGATTGGCAGCTTGTGCTGCTAGTAGCATTCGTCATTCTGCTAAAAAGCGTTCAAAAATGAGCCAGATAGTAAGAGCATTAGAAGGAGATGTATCACTAGAAGACTTGAAGGAAAGCATGATAAAATCTCCAGCGCCGCAGACCGGTGTTTATACCACTACAGGATCGGAATATGATACAATGCAATACAATGCAGATATGGCAAAGTTCAGAAAACAAATAATGTCAAGTCAAGAATTTGATTAG 1197 0.4002 MDHVVRVQQNPNGASGVWGAPHPLMNSGEMSSNYSYGMGPPGSMQSSPGLSLTLKGGTFTYEELASATKGFANENIIGQGGFGYVHKGILPTGKEIAVKSLKAGSGQGEREFQAEIDIISRVHHRHLVSLVGYCVSGGQRMLVYEFVPNKTLEYHLHGKGVPTMDWPTRMRIALGSARGLAYLHEDCSPRIIHRDIKAANVLIDDSFEAKVADFGLAKLTTDTNTHVSTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVMLLELLTGKRPLDLTNAMDESLVDWARPLLSRALEEDGNFAELVDPFLEGNYDHQEMIRLAACAASSIRHSAKKRSKMSQIVRALEGDVSLEDLKESMIKSPAPQTGVYTTTGSEYDTMQYNADMAKFRKQIMSSQEFD* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2526 398 PANTHER RECEPTOR-LIKE KINASE 1 398 - -
Mtr8g2526 398 ProSiteProfiles Protein kinase domain profile. 71 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2526 398 SMART serkin_6 71 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2526 398 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 398 - -
Mtr8g2526 398 Gene3D Phosphorylase Kinase; domain 1 44 146 - -
Mtr8g2526 398 MobiDBLite consensus disorder prediction 1 21 - -
Mtr8g2526 398 SUPERFAMILY Protein kinase-like (PK-like) 46 344 IPR011009 -
Mtr8g2526 398 ProSitePatterns Protein kinases ATP-binding region signature. 77 99 IPR017441 GO:0005524
Mtr8g2526 398 Gene3D Transferase(Phosphotransferase) domain 1 147 360 - -
Mtr8g2526 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Mtr8g2526 398 Pfam Protein tyrosine and serine/threonine kinase 74 273 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2526 Mtr-Chr8 35616488 35618854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2526 46 389 Trihelix Transcription Factor Family AT1G70460 59.538 7.87e-145 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mtr8g2526 PK_Tyr_Ser-Thr 4.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2526 - - gmx:100805872 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0773 5 7580040 7586482 Mtr8g2526 8 35616488 35618854 ECH
Mtr8g2526 8 35616488 35618854 Mtr8g2526 8 35616488 35618854 ECH
Mtr5g0773 5 7580040 7586482 Mtr8g2526 8 35616488 35618854 PCT