Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2507 ATGGATAACAAGAAACTTGTGGAAGTGGGTACGTGTTTGAACAAGGACAAGAAGAAAGCTGTTGAAGTGGGAACGACTTTGAACATGGAAAAGAACAAAGGTGTTGAAGTCGGAACGTCTTTGAACTTGGATAAGAAGAAAGTTGTTTGTCGTCCCTATGACAACATCAAAGATGTGAATGAATCCAAAGATCTTTGGACTTTTGCTGTTAGGATTGCAGATGCTTGGTCTGTTATGGGTAAATCCAGACAAGAGCATTTCGATATGGTCGTGGTTGATAAGCAGATCATTCTACTGTCAAATAGTAGTGACAGTGTTCAAATTACAGTTCCAACTGATGAACTTGATGAATGGAAAGGAAAGTTGGTGAAGAATAAGACTTATGAGATGATGAACTTTAAGGTCCTTAAAAATGATATTGTTTTGAAGGCATGCACTCATCCATACAGGCTTGCTGTCACCGGTGCAACCATTATCAAAGAAGTTGATTTTCCTCAAATCCCTATACTCCCTATGAGGTTCAAAGACTTCGGTGAAATATTGGCTAGAAAGTACCGTACTGATTTGCTCACAGATGTCATTGGATGTTTCCATTCAGTCACCAATACAAATCAGAATAATGGCAGACTCAAATCAATGAATTTTCTTCTTAAGGATACTAGTGGTCACTTGATCCACGTATGTATGTGGGATGATTTTGCAAAGCATTTCATGGATTCATTCTCTAAGGTCAATGATGACAGGGTCTTCGTTGTTGTGAAATATGGGAGGATCAAGCCTGCTCATGGAGTTTACCCGTTATGTGTTACAAACACATCGTCTAGTACTGAGCTCATTGTTAATGCTGATATTCCTGAAATCAATGAATTTAAAGCGAGATTAGGAACAACTTGA 894 0.3848 MDNKKLVEVGTCLNKDKKKAVEVGTTLNMEKNKGVEVGTSLNLDKKKVVCRPYDNIKDVNESKDLWTFAVRIADAWSVMGKSRQEHFDMVVVDKQIILLSNSSDSVQITVPTDELDEWKGKLVKNKTYEMMNFKVLKNDIVLKACTHPYRLAVTGATIIKEVDFPQIPILPMRFKDFGEILARKYRTDLLTDVIGCFHSVTNTNQNNGRLKSMNFLLKDTSGHLIHVCMWDDFAKHFMDSFSKVNDDRVFVVVKYGRIKPAHGVYPLCVTNTSSSTELIVNADIPEINEFKARLGTT* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2507 297 CDD RPA1_DBD_A_like 70 159 - -
Mtr8g2507 297 SUPERFAMILY Nucleic acid-binding proteins 52 162 IPR012340 -
Mtr8g2507 297 CDD RPA1_DBD_B_like 192 294 - -
Mtr8g2507 297 SUPERFAMILY Nucleic acid-binding proteins 173 294 IPR012340 -
Mtr8g2507 297 Gene3D - 166 297 IPR012340 -
Mtr8g2507 297 Gene3D - 52 163 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2507 Mtr-Chr8 35418609 35422352 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2507 56 291 Core DNA Replication Machinery Family AT5G45400 23.643 2.11e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2507 - - mtr:MTR_8g077490 385.571