Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2498 ATGGCAACCTCTTGGACTGCAAGGCAGAACAAACTGTTTGAACAAGCATTGGCTTTATATGACAGGGAAACTCCTGAAAGATGGCACAATGTGGCCAAAGTGGTTGGAAAATCAGTTGAAGATGTTAAGAGTCACTATGAGATCCTCAAAGAAGATGTTCAACGTATTGAGCATGGCCATATCCCTTTTCCTCGTTACAAAACTAACACCAACTCCTAA 219 0.4155 MATSWTARQNKLFEQALALYDRETPERWHNVAKVVGKSVEDVKSHYEILKEDVQRIEHGHIPFPRYKTNTNS* 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2498 72 Gene3D - 2 63 - -
Mtr8g2498 72 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 72 IPR044636 GO:0003700
Mtr8g2498 72 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 72 - -
Mtr8g2498 72 ProSiteProfiles SANT domain profile. 1 54 IPR017884 -
Mtr8g2498 72 CDD SANT 4 50 IPR001005 -
Mtr8g2498 72 SUPERFAMILY Homeodomain-like 4 58 IPR009057 -
Mtr8g2498 72 SMART sant 1 52 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2498 Mtr-Chr8 35355296 35356691 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr8g2498 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2498 - - lja:Lj4g3v0973380.1 129.798