Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2468 ATGGCTCCTTCTTCTTTTTCCTCTCACGCTGTAGCTCTGAAAAAATATGATGTTTTCATCAGCTTTAGAGGCGAAGACACTCGCGCTGGATTCACAAGCCATCTTTACGAAACTTTCTTACAAAGCAAGTTTCATACATACATAGACTACAGGATCCAAAAAGGAGACCATGTTTGGGCAGAACTTACGAAAGCAATCAAACAATCCACTATCTTTTTGGTAGTGTTCTCGAAGAACTATGCGTCTTCAACATGGTGTTTGAACGAACTCGTTGAAATAATGGAGTGTAGTAACAAAGACAACGTTGCTGTTATTCCTGTGTTTTACCATATTGACCCCTCCCGCGTGCGGAAACAGACTGGAAGTTACGGCACTGCGTTGGCAAAACACAAGAAGCAAGGCTGTGATCATAAGATGATGCAAAATTGGAAGAATGCTCTTTTTCAAGCAGCCAATTTATCCGGTTTTCATTCTACCACATACAGGACTGAATCTGACTTGATTGAAGACATTACCAGAGTTGTATTGAGAAAATTGAATCACAAGTACACAAATGAGCTTACGTGTAATTTCATACTCGATGAAAACTATCGCACCATTCAGTCTTTAATAAAAAAAATTGATTCAATAGAAGTTCAAATCATTGGACTTTGGGGCATGGGGGGCATAGGTAAGACAACCCTTGCTGCTGCTTTGTTTCAAAGGGTCTCTTTCAAGTATGAAGGCAGTTGCTTCTTAGAAAATGTGACAGAAGTATCAAAAAGGCATGGAATCAATTTCATATGCAACAAACTTCTTTCTAAGTTACTAAGGGAAGATCTTGATATTGAATCTGCCAAAGTAATACCATCCATGATCATGAGAAGACTCAAACGCATGAAATCTTTCATTGTACTAGATGATGTTCATACTTTGGAACTTCTGCAAAACTTGATTGGAGTCGGGAATGGTTGGCTAGGAGATGGTAGCATAGTCATTGTAACGACAAGGGATAAGCATGTGCTGGTTAGTGGAGGAATTGACAAAATTCATCAAGTTAAAGAAATGAACTCTCGAAACTCCCTCCAGCTTTTCAGCTTCAATGCTTTTGACAAAGTCTTACCTAAGGAGGGATATGTGGAGCTCTCAGAAAGAGTGATTGATTACGCCAAAGGCAACCCTTTAGCTCTAAAAGTTTTGGGATCATTTCTTTGTAGCAAAAGTGAAATAGAATGGAACTGTGCATTAGCTAAACTGAAGGAAATTCCCAATGCAGAAATCGATAAGATAATGAGATGGAGTTATAATGAATTAGATGATAAAGAGAAAAACATATTTCTGGACATTGCATGCTTTTTCAAAGGACATGAAAGGGATAGGATGACAACAATATTAAATCAGTGCGGTTTCTTTGCAGATATAGGGATAAGAACTCTTTTAGACAAGGCTCTTATAAGAGTTGACTTTGAAAATTGCATACAAATGCATGACTTGATACAAGAAATGGGCAAACAAGTCGTTCGTGAAGAATCTCTTAAGAATCCAGAACAAAGCAGTAGATTGTGGGATCCTAAGGAAGTTTATGATGTATTGAAAAATAATAGAGAAACAAAGATCGTGGAAGCTATATTTTTAGATGCCACAGAATCTAGACATATAAATTTAAGCCCCAAAACATTTGAAAAGATGCCAAACCTAAGGTTACTTGCTTTTCGAGATCACAAGGGAATTAAATCTGTAAGCCTTCCCAGTGGCCTTGACTCGTTGCCAAAAAATTTGAGATATTTTTTGTGGGATGGATATCCATCGAAGTCTCTGCCTCCAACCTTTTGTCCTGAAATGCTTGTGGAGTTTTCCCTACAAGACAGCCATGTGGAAAACCTTTGGAATGGAGAATTGAATTTGCCAAATTTGGAGATACTTGACCTAAGCAACTCGAAAAAGCTGATAGAGTGTCCAAATGTATCTGGTTCCCTGAATCTAAAATATGTAAGACTTAATGGTTGTTTAAGCTTGCCTGAAGTTGATTCGTCAATTTTCTTTCTCCAAAAGCTTGAAAGTTTAATCATAGATGGATGCATATCGCTTAAGAGCATTTCCAGTAACACTTGTTCACCAGCCCTCCGTGAATTGAATGCCATGAATTGCATCAATCTCCAAGAGTTCTCCGTCACATTTTCTTCAGTTGATAATTTGTTTTTGAGTTTGCCTGAGTTCGGTGCAAATAAATTTCCATCATCAATATTGCATACAAAAAATCTTGAATATTTTTTATCTCCTATCAGTGATAGTCTTGTGGATCTTCCTGAAAACTTTGCCAATTGTATCTGGCTTGCGAATTCACTGAAAGGTGAACGTGACTCTTCCATCATCTTACATAAAATACTTCCTAGTCCTGCTTTCCTGAGTGTAAAACACTTAATATTATTTGGTAATGATGTTCCTTTCTTGTCTGAAATCCCAGACAACATTTCCTTACTATCGTCATTAAAGTCTTTAAGACTATTTAATATAGCCATTAGAAGCTTGCCTGAAACCATTATGTATCTTCCCCAACTCGAAAGTCTTAGTGTTTTCAATTGTAAAATGCTGCTATTCCGGCTCTTCCAAAGTTCATTCCATTTTTCATTGTCAGGAATTGTGAATCTCTTGAGAAAGTGTTGCGTCCAATGA 2652 0.3741 MAPSSFSSHAVALKKYDVFISFRGEDTRAGFTSHLYETFLQSKFHTYIDYRIQKGDHVWAELTKAIKQSTIFLVVFSKNYASSTWCLNELVEIMECSNKDNVAVIPVFYHIDPSRVRKQTGSYGTALAKHKKQGCDHKMMQNWKNALFQAANLSGFHSTTYRTESDLIEDITRVVLRKLNHKYTNELTCNFILDENYRTIQSLIKKIDSIEVQIIGLWGMGGIGKTTLAAALFQRVSFKYEGSCFLENVTEVSKRHGINFICNKLLSKLLREDLDIESAKVIPSMIMRRLKRMKSFIVLDDVHTLELLQNLIGVGNGWLGDGSIVIVTTRDKHVLVSGGIDKIHQVKEMNSRNSLQLFSFNAFDKVLPKEGYVELSERVIDYAKGNPLALKVLGSFLCSKSEIEWNCALAKLKEIPNAEIDKIMRWSYNELDDKEKNIFLDIACFFKGHERDRMTTILNQCGFFADIGIRTLLDKALIRVDFENCIQMHDLIQEMGKQVVREESLKNPEQSSRLWDPKEVYDVLKNNRETKIVEAIFLDATESRHINLSPKTFEKMPNLRLLAFRDHKGIKSVSLPSGLDSLPKNLRYFLWDGYPSKSLPPTFCPEMLVEFSLQDSHVENLWNGELNLPNLEILDLSNSKKLIECPNVSGSLNLKYVRLNGCLSLPEVDSSIFFLQKLESLIIDGCISLKSISSNTCSPALRELNAMNCINLQEFSVTFSSVDNLFLSLPEFGANKFPSSILHTKNLEYFLSPISDSLVDLPENFANCIWLANSLKGERDSSIILHKILPSPAFLSVKHLILFGNDVPFLSEIPDNISLLSSLKSLRLFNIAIRSLPETIMYLPQLESLSVFNCKMLLFRLFQSSFHFSLSGIVNLLRKCCVQ* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2468 883 Pfam NB-ARC domain 200 431 IPR002182 GO:0043531
Mtr8g2468 883 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 442 IPR027417 -
Mtr8g2468 883 SMART till_3 15 153 IPR000157 GO:0007165
Mtr8g2468 883 Pfam TIR domain 15 187 IPR000157 GO:0007165
Mtr8g2468 883 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 156 IPR035897 -
Mtr8g2468 883 Gene3D Ribonuclease Inhibitor 487 729 IPR032675 -
Mtr8g2468 883 ProSiteProfiles TIR domain profile. 14 179 IPR000157 GO:0007165
Mtr8g2468 883 Gene3D Ribonuclease Inhibitor 760 881 IPR032675 -
Mtr8g2468 883 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 843 IPR044974 GO:0006952
Mtr8g2468 883 Gene3D - 348 432 IPR042197 -
Mtr8g2468 883 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 10 843 - -
Mtr8g2468 883 Gene3D - 177 339 IPR027417 -
Mtr8g2468 883 Gene3D - 13 176 IPR035897 -
Mtr8g2468 883 SUPERFAMILY L domain-like 487 861 - -
Mtr8g2468 883 PRINTS Disease resistance protein signature 214 229 - -
Mtr8g2468 883 PRINTS Disease resistance protein signature 289 303 - -
Mtr8g2468 883 PRINTS Disease resistance protein signature 383 397 - -
Mtr8g2468 883 PRINTS Disease resistance protein signature 626 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2468 Mtr-Chr8 35102776 35107517 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2468 14 849 WRKY Transcription Factor Family AT4G12020 30.588 3.77e-92 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2468 - - mtr:MTR_8g018480 1261.13