Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2460 ATGCAAACAAAAATCAACACAACCTTGAACACCAGCAATCAAGCTAACCAAACCAGACAGAATGCTGAAAACGGCGAACTGAATGGAACCGATCTCACACTTGCGGCTGTTGACAATCCGTCAAGTGCGGTCGAGTGGGGACTGGCAGAAATGATCAATCAACCTGAGCTGATTCGAAAAGCCATAGAAGAATTAGATAATGTCGTTGGTACAAGAAGGTTGGTCCAAGAAAGTGATATTCCAAAGCTCGATTATGTCAAGGCATGTGCTAGGGAAGCATTTCGACGCCATCCGATCAATGATTTCAACCTACCACATATGTCAATGGAAAATACAGTTGTTGATAACTACTATATCCCCAAAGGAAGGGAAAAAGCATTGGAGATAAGTGACCATATTGGTAAGCAGGTTTGGAAGTTGGTTTCTTCTCCAGAGTCTCTAATCACTCGTTTACTCAAAGTTAAATATTTTTCTCGTAGTGACTATTTTGGAGCTAGCATTGGCCATAATCCTAGTTATGTTTGGCGTAGTATTTGGAGTGCTAAAGATGTGATTCGGCGTGGTTTTCAGTGGAGTATAGGTACAGGCGAACACATACCAGTTTGGGATCATCCTTGGATCAGTAATGTTGCACGAATTTTACCTTCAACTCATCATCAATTGGAGTGGCCTTCCATCACTGTTTCTGACTTGTTGATTACACCCGAGAAACAGTGGAATGTGGAGCTCATTAATACTTTCTTTGACTCTAGTATTGCCAGAAATATTTTTACACTCCGTTGCTTCCTTCGGTGTGCAGTGTGTGATGATTTCGGAGAGGATAGTAACCATTTGTTCTTTATGTGTAGTAAAAGTATGCTTTATTGGCAACGTATTGGCTTATGGAGCCCTTTGATGGCTGTCTTTGATATTAATGTCAGTTTTCCAACCAATGTATTTGCTATCCTACAACACCTGGATCAGCAGCAAAAGCAAATTTTCAGTGTGACCCTTTGGAGTATTTGGAAGCATCGAAACAATAAGGTATGGAACAACATCACTGATACAGCTCAAGATATTTGTGCTCGTGCAGGTTCTCTTCTTACTAGCTGGAGGAATGCTCAGAATATTCGGCATCCTAGCCCTCAAAATCCTTCCACCCCGAATGATTTGAAGTGGGTTAAACCAAGTCCCGGCAGGTTTACTTGTAATGTTGATGCGTCCTTTTCTCAAGCTCGGAATCGGGTTGGTATTGGTGTTTGTATTCGCGATGAAGAAGGTCGTTTTGTTTTAGCCAAGACTGAATGGATGACTCCGCTCCTTGATGTCGAGTTGGGTGAGGCTTTGGGTTTGTTATCAGCAATGCACTGGGTTCGTGATCTGCAACTAGGTATTGTGGACTTTGAGCTTGACTCCAAAAGTGTGGTAGACAGTCTTTATGGTAGTACTAGTGGCGTCTCTAATTTTAGTGCAGTTATTAATGAATGTAGACGTCTGTTAGCTTCTGATTTAGTAACCTCTGATGTTAGGTTCATTCGGAGACAAGCCAACGAAGTTGCTCATAGCTTTGCTAGAGTGGCTTTGCTAGAATGGCTTTGCGTCATGCTAGTTTCCATATTCATATTAGGATTCCATCTTGTATCTCTACTATTATTTTGA 1638 0.4158 MQTKINTTLNTSNQANQTRQNAENGELNGTDLTLAAVDNPSSAVEWGLAEMINQPELIRKAIEELDNVVGTRRLVQESDIPKLDYVKACAREAFRRHPINDFNLPHMSMENTVVDNYYIPKGREKALEISDHIGKQVWKLVSSPESLITRLLKVKYFSRSDYFGASIGHNPSYVWRSIWSAKDVIRRGFQWSIGTGEHIPVWDHPWISNVARILPSTHHQLEWPSITVSDLLITPEKQWNVELINTFFDSSIARNIFTLRCFLRCAVCDDFGEDSNHLFFMCSKSMLYWQRIGLWSPLMAVFDINVSFPTNVFAILQHLDQQQKQIFSVTLWSIWKHRNNKVWNNITDTAQDICARAGSLLTSWRNAQNIRHPSPQNPSTPNDLKWVKPSPGRFTCNVDASFSQARNRVGIGVCIRDEEGRFVLAKTEWMTPLLDVELGEALGLLSAMHWVRDLQLGIVDFELDSKSVVDSLYGSTSGVSNFSAVINECRRLLASDLVTSDVRFIRRQANEVAHSFARVALLEWLCVMLVSIFILGFHLVSLLLF* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2460 545 Pfam Cytochrome P450 8 123 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g2460 545 Gene3D - 393 523 IPR036397 GO:0003676
Mtr8g2460 545 CDD RNase_H_like 396 518 IPR044730 -
Mtr8g2460 545 PRINTS E-class P450 group I signature 44 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g2460 545 PRINTS E-class P450 group I signature 87 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g2460 545 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 29 130 - -
Mtr8g2460 545 Pfam Reverse transcriptase-like 397 518 IPR002156 GO:0003676|GO:0004523
Mtr8g2460 545 Gene3D Cytochrome P450 5 145 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g2460 545 SUPERFAMILY Ribonuclease H-like 394 523 IPR012337 -
Mtr8g2460 545 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 29 130 - -
Mtr8g2460 545 SUPERFAMILY Cytochrome P450 21 122 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2460 Mtr-Chr8 35044711 35048553 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2460 30 122 Cytochrome P450 AT5G05260 66.667 1.31e-36 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2460 - K12153 mtr:MTR_6g453270 177.563