Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2426 ATGATGGAGTCATGTGTCCCACCTGGATTTCGGTTCCACCCAACGGATGGAGAGCTTGTTGGTTATTATCTAAGAAAGAAAGTAGCTTCTCACAAGATTGATCTTGATGTTATCAAAGAGATCGATCTATATCGTATTGAACCCTGGGATCTCCAAGAGAGATGTAGAATTGGGAATGAGGAGCAACATGAGTGGTATTTTTTTAGTCACAAAGATAAGAAATATCCAACAGGGACGAGAACGAATAGAGCTACAATGGCAGGGTTCTGGAAAGCAACCGGAAGAGATAAGTCGGTGTATGAACGAACAAAACTGATTGGAATGAGGAAGACACTCGTTTTCTACAAAGGAAGAGCACCTAATGGACAGAAAACTGATTGGATCATGCATGAATATAGGCTTGAAACAGTTGAAAATGCACCTCCACAGGAAGAAGGTTGGGTTGTGTGCAAAGCATTCAAGAAAAAAACAAGTGTCCAAGCAAAAACAAATGAAAGATGGGATCCAAGCCACTTACATGATGAACAAACAAGTAGCATCATCTCAAGGGTGGACCCTATTGACCTCATCTTAAGACAACCACAGAGGATTTCAGCTCAAAATTTCATGTACAAACAAGAGATAGAAGCAGAAGCAGATACCTTATTAAGGTTCATGCATTCAGAACAATTGGTACCTCTTCCTCAACTACAAAGTCCCTCTTTAACAAAGAGGCAAAACTCAATGCCAATAATATCAGAGAAAGTGACTGATTGGAGGGATCTTGACAAGTTTGTGGCTTCTCAGTTGAGTCAAGAAGATCATAGGCATGAAACAAGCTCAGACATGTCATTGTTCCTACTTCAGAGTAGTAAGGATGATGAAGAGAACAAGTTAAGCTCATTTTTAACTACAAGGTCAGATTGTGACATTGGAATATGTGTATTTGAAAATTAA 936 0.3942 MMESCVPPGFRFHPTDGELVGYYLRKKVASHKIDLDVIKEIDLYRIEPWDLQERCRIGNEEQHEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYERTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLETVENAPPQEEGWVVCKAFKKKTSVQAKTNERWDPSHLHDEQTSSIISRVDPIDLILRQPQRISAQNFMYKQEIEAEADTLLRFMHSEQLVPLPQLQSPSLTKRQNSMPIISEKVTDWRDLDKFVASQLSQEDHRHETSSDMSLFLLQSSKDDEENKLSSFLTTRSDCDIGICVFEN* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2426 311 SUPERFAMILY NAC domain 3 155 IPR036093 GO:0003677|GO:0006355
Mtr8g2426 311 ProSiteProfiles NAC domain profile. 6 155 IPR003441 GO:0003677|GO:0006355
Mtr8g2426 311 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Mtr8g2426 311 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 286 - -
Mtr8g2426 311 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 4 286 - -
Mtr8g2426 311 Pfam No apical meristem (NAM) protein 7 134 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2426 Mtr-Chr8 34691490 34695087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2426 2 311 NAC Transcription Factor Family AT2G18060 57.808 1.22e-141 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr8g2426 NAM 3.7e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2426 - - qsu:111996673 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2426 8 34691490 34695087 Mtr8g2426 8 34691490 34695087 ECH
Mtr5g0858 5 8468140 8472735 Mtr8g2426 8 34691490 34695087 PCT