Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2424 ATGATGAAGCGAGCAAGGAAATCTAATAGGGTTTCGTGGGCTTCTCCTGCTAATCTATGCCAGGTCAAATTGTTCTTGTCCGAAGATTACCCGTCAAAAGTTGGTCTGAATTTACAAGACAGTCTTGAAGCAAAGGCGTCATCAATGTTGTGTTATAGTACTAATGAATCTATCGATTTACCTCCTGGGTTCGAAAGCGGTCATTTCCCTAACCAATCGAAGGTTCAATTCTCCCACATTCCTAAGATAAAATGGGAATGCCCTCTCTCGTTTGTGTTCAGTCCTAATTGGCTAGTTGCAGCTGGGCAAGAAAGTAGGGAGAAAGAGGTTCAGAAGCTGAGAGAAATAAGAGTGCTTGAAGCAGTTTATCCCCGACCCTCTGCCATTCCTCCTAGCCCTTCTGTTTCTTTGGATGTAGAAGAAGAAGAATATGATGATAACAGTACTCCTCTCATCCCCATCATTCCCATCGAGGAGGAAGAGTCTATGACTAATTTGCCTGAATTAGCAGCAGCAGTGAACACTCATCCCAATGTTCAGCCACAGAATTTGCATCAACACATGTCAGCAACAACTTCCATTAGTTCAGACCGTAACTCCTCCCGTACTGTCTCCTCAGATGCTCGTCTAATGCCCTTAGCAGGGGTATCTTCTAGTTTGGAAGCTGACGCAGCTGCAGCCTCTGAAGTTGTGGCGGCCATCTTGAAGAGTAATGAGCAAGCGGGCTTAATTGACATGGATCTACTCGTAAAAATTTTAAATGACCCAAAAATGATTGAGAATTTGATCAATGAGCATGGAGTTGCCGCCACCACTGCAAGTTCGTCCTCAAATTCCATGGTTACACCCACTTCTGGATTGAAAGCTGCTTCTACACTCGATGTGGCAGCTTCTAGGAACTCACATACTAGTTCTGTGGGTTTTTCTGGGTTGAAGCCTGCAATTCCATCAGTTTCATCTTTCAATCCTACATCTGGTAAGCCAACAACTCTGTTTGCTCCTGCAATTCCATCGTATTCAATTGTGTCTTCTGCACATGATAAGCCAGCAACTGCGTCAGCTCCATTGTCTAGGCCAGTATCCAGTAAACCAATATCCCCCTCTGTTTTTATGTCCACACCTACACTTGAACCTCATATGCCCAGACCTGTCAACAATAATTTTCACATGTCAAGTCCAATGCCAACTGCATTACATACTCAGCCTCAGCTAGATTCATTTCTGGCATCTGGGGTGAAGCGATCTGCATCTTTCACTTTTTCTTCTAGTGAACAAAGCACAGTTCCATTGCCTCCTTCTGGGAACTTGCATACTGTTTTGAACAATACACAACCCACTGCTAGTACAAAGCCTTATCAAACAAGTTCAGGTTCAGCATCTGCTGTAAAGGATGTCAACTATTATAAAAACCTCATTAGGCAACATGGTGCAGATGGACAAGATAAGCTGGACTCACAAATAGGTAGCCATCATAGTAACTTCCAAGATATGAAATTGGCACATAACAATAATCAAGGGGAAGTCAAATACAAAAGCAAGAAACAATGCATTTACTTTAATAGCTCGAGGGGGTGCAGGAATGGTTCCGATTGCCCCTTTCAGCATGATGTTTCAGCTGAGTCGGGAGCTGGTAACTTCCTAGGGGGGCAGAGTGCTAAAAGATTTAAGTTGTGA 1674 0.4355 MMKRARKSNRVSWASPANLCQVKLFLSEDYPSKVGLNLQDSLEAKASSMLCYSTNESIDLPPGFESGHFPNQSKVQFSHIPKIKWECPLSFVFSPNWLVAAGQESREKEVQKLREIRVLEAVYPRPSAIPPSPSVSLDVEEEEYDDNSTPLIPIIPIEEEESMTNLPELAAAVNTHPNVQPQNLHQHMSATTSISSDRNSSRTVSSDARLMPLAGVSSSLEADAAAASEVVAAILKSNEQAGLIDMDLLVKILNDPKMIENLINEHGVAATTASSSSNSMVTPTSGLKAASTLDVAASRNSHTSSVGFSGLKPAIPSVSSFNPTSGKPTTLFAPAIPSYSIVSSAHDKPATASAPLSRPVSSKPISPSVFMSTPTLEPHMPRPVNNNFHMSSPMPTALHTQPQLDSFLASGVKRSASFTFSSSEQSTVPLPPSGNLHTVLNNTQPTASTKPYQTSSGSASAVKDVNYYKNLIRQHGADGQDKLDSQIGSHHSNFQDMKLAHNNNQGEVKYKSKKQCIYFNSSRGCRNGSDCPFQHDVSAESGAGNFLGGQSAKRFKL* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2424 557 ProSiteProfiles Zinc finger C3H1-type profile. 510 538 IPR000571 GO:0046872
Mtr8g2424 557 MobiDBLite consensus disorder prediction 355 372 - -
Mtr8g2424 557 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED 2 557 - -
Mtr8g2424 557 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 2 557 - -
Mtr8g2424 557 MobiDBLite consensus disorder prediction 349 372 - -
Mtr8g2424 557 MobiDBLite consensus disorder prediction 421 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2424 Mtr-Chr8 34665572 34674277 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mtr8g2424 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2424 - - cam:101501407 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2424 8 34665572 34674277 Mtr8g2424 8 34665572 34674277 ECH