Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2408 ATGCTCTCAACATCTTTCCCCGCACCTCTCAGCACCGCCACTTTTGCTGGCAAAACTATTTCATCACCGCCGTTCCACGCAAAATCAAGGAGAGTACTCATTTCTGCAACAGCCAGCACCACTGAACCTTCATGCACGTCGTTGTACGAGATTCTTGGAGTTGCAGCCGTAGCTTCTGATCAGGAGATTAAGGCGGCCTACCGACGACTTGCCAGGGTTTCCCACCCTGATGTGGCGGCGGTTGATCGGAAGGTTTCTTCGGCGGATGAGTTCATGAAGATTCATGCTGCGTATTCCACTCTTTTGGATCCTGAGAAGCGAGCTAGCTATGATAGAAGCTTGTTCCGGCAACAGCAACCGCTGACGGTGACGGGATTTTCTGGTTACGGTTGTCGGAAATGGGAAACGGACCAGTGTTGGTAG 423 0.5177 MLSTSFPAPLSTATFAGKTISSPPFHAKSRRVLISATASTTEPSCTSLYEILGVAAVASDQEIKAAYRRLARVSHPDVAAVDRKVSSADEFMKIHAAYSTLLDPEKRASYDRSLFRQQQPLTVTGFSGYGCRKWETDQCW* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2408 140 PRINTS DnaJ domain signature 49 67 IPR001623 -
Mtr8g2408 140 PRINTS DnaJ domain signature 67 82 IPR001623 -
Mtr8g2408 140 PRINTS DnaJ domain signature 86 106 IPR001623 -
Mtr8g2408 140 Gene3D DnaJ domain 34 125 IPR036869 -
Mtr8g2408 140 PANTHER - 3 140 - -
Mtr8g2408 140 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 3 140 - -
Mtr8g2408 140 Pfam DnaJ domain 48 111 IPR001623 -
Mtr8g2408 140 ProSitePatterns Nt-dnaJ domain signature. 91 110 IPR018253 -
Mtr8g2408 140 CDD DnaJ 49 103 IPR001623 -
Mtr8g2408 140 SUPERFAMILY Chaperone J-domain 44 126 IPR036869 -
Mtr8g2408 140 SMART dnaj_3 46 106 IPR001623 -
Mtr8g2408 140 ProSiteProfiles dnaJ domain profile. 47 114 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2408 Mtr-Chr8 34507657 34508544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2408 36 111 C2H2 Transcription Factor Family AT1G74250 39.241 4.93e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2408 - - cam:101494220 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2408 8 34507657 34508544 Mtr8g2408 8 34507657 34508544 ECH
Mtr5g0879 5 8727286 8728052 Mtr8g2408 8 34507657 34508544 ECH