Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2406 ATGATCATAAATGTGAGAGATTCGAAGATGGTGCAACCATCAAAGGAGGTTGCACGACGGAGGGTGTGGAACTCCAATGTTGATTTGAAGACGCCAAATATTCACACGCCCAGTATTTACTTCTATAGAACCAACACCACTTCCAAATTCTTCGACACCAAGATTATGAAGGAAGCTCTCAGCAAAGTGCTTGTCTCATTCTATCCAATGGCGGGTCGTTTTTGTTACGACAAAGACGGTCGTGTAGAGATCGACTGTGACGGTCAAGGGGTGCTCTTTGTTGAAGCTGCCACTAACTCATTCATAGATGATTTTGGTGACTTTGCTCCCACATTGCACTTGGGCCAGCTTATTCCCATTGTTGATTACTCGCGCGGAATCGAAACATATCCCCTCCTAGTGTTGCAGGTAACATACTTCAAATGTGGAGGAGTCTCACTTGGTGTTGGGATGCACCATTATGTAGCCGATGGAGCTTCTGCTTTTCACTTCATCAATACATGGTCAGATGTAACTCGTGGTCTAGATGCTTCCATCCCACCATTTATTGATCGGACACTACTCCATGCCCGCGATCCGCCACGACCAATTTTTGATCACGTTGAATTCAAATCTTCACCATCCATGAAAATTCCACAACAGCCCCCTGGCTCAGTGGATGTAACAAGATCGATTTACAAATTGTCTCGCGAACAACTCAATAAGTTGAAAGATAAGTCCAAAGAAGTTGGCAACACAATCAACTACACCACTTATGAGATGTTAGCTGGTCATGTTTGGAGAAGTGTCTGCATAGCAAGATCACTTCCCAATGATCAAGAAACCAAATTGTATATCCCAACAGATGGAAGATCAAGGTTGCAACCTCCACTTCCATTGGGTTACTTCGGCAATGTGATATTCTCAACCACACCTATAGCTCTAGCAAGTGATCTCATTTCAAAACCAACATGGTATGCTGCAAGCAGAATTCACAATGCATTGTTGCGAATGGACGATGAATACATGAAATCTGCTATTGATTATCTAGAGTTACAACATGATATAAGAGCTATTCCCCGCAACCCTAATGTTAAGTGTCCAAATCTTGCGATCATTAGTTGGGCAAAGTTTCCAATCTATGATGCTGATTTTGGTTGGGGAAGGCCAATTTTCATGGGACCTGGGGCTGATTTTGATGGACAGTGTTTCATAATTCCAAGCTCAACAAATGATGGGAGTTTATCTGTGGTAATTTCTCTTCAACATGAGCACATGGAAGTGTTTAAGGAATTGGTGTATGATATTTGA 1290 0.4248 MIINVRDSKMVQPSKEVARRRVWNSNVDLKTPNIHTPSIYFYRTNTTSKFFDTKIMKEALSKVLVSFYPMAGRFCYDKDGRVEIDCDGQGVLFVEAATNSFIDDFGDFAPTLHLGQLIPIVDYSRGIETYPLLVLQVTYFKCGGVSLGVGMHHYVADGASAFHFINTWSDVTRGLDASIPPFIDRTLLHARDPPRPIFDHVEFKSSPSMKIPQQPPGSVDVTRSIYKLSREQLNKLKDKSKEVGNTINYTTYEMLAGHVWRSVCIARSLPNDQETKLYIPTDGRSRLQPPLPLGYFGNVIFSTTPIALASDLISKPTWYAASRIHNALLRMDDEYMKSAIDYLELQHDIRAIPRNPNVKCPNLAIISWAKFPIYDADFGWGRPIFMGPGADFDGQCFIIPSSTNDGSLSVVISLQHEHMEVFKELVYDI* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2406 429 Gene3D - 1 205 IPR023213 -
Mtr8g2406 429 Pfam Transferase family 3 426 - -
Mtr8g2406 429 Gene3D - 213 429 IPR023213 -
Mtr8g2406 429 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 428 - -
Mtr8g2406 429 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2406 Mtr-Chr8 34433340 34437224 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2406 1 429 Monolignol Biosynthesis Gene Families AT5G48930 66.282 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2406 K13065 - gmx:100820075 655.21