Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2400 ATGGCTTTTAGAGAATCTTCATCTTCATCTTCTTCTTTCTTCAGTTATGGATTCACCTACGATGTGTTCCTCAGCTTTAGAGGCTTAGACACTCGCTATGGTTTTACTGGAAATCTCTACAAAGCTCTTTATGATAAGGGAATCCACACCTTTATTGACGATGAAGAACTTCAAAGAGGACATGAAATCACACCATCACTTTTAGAGGCAATTGAAGAGTCTAGGATTGCCATTATTGTGCTCTCTAAAAACTATGCTTCTTCTTCATTTTGCTTACATGAACTTGTCAAGATCCTTGACTGCATTAAGGGAAAAGGTAGGTTGGTTTGGCCAATCTTTTATGATGTTGATCCTTCTGATGTGAGGAAGCAGACAGGATCTTACGGTGAAGCTTTAGCTATGCTTGGAGAGAGATTCAATGATAATAACTTGCAAATATGGAAGAATGCTTTGCAACAAGTAGCTAACTTGTCTGGATGGCATTTCAAAATTGGGGATGGATATGAGTACGAGTTTATTGGAAAGATTGTTGAACATGTTTCCAAGAAGATGAATCGTGTTGCTTTACCCGTTGCTGACTACCCAGTTGGACTAGAGCCTCAAGTTCTAGAAATAAATTCACTTCTTGATATCGGGTCCGATGATGAGGTAAACATGATTGGGATCCATGGAAGTGGAGGGATAGGTAAAACAACACTTGCTCTGGCTGTTTATAATCTGATTGCCGATCACTTTGAAGCTTTGTGTTTTCTTGAAAATGTGAGAGAAAATTCAAATAAACACGGGTTACAACATCTCCAAAAGATTCTTCTTTCAGAAACCCTTGGAGAAAAGAAAATTAAGTTAACAAGTGTCAAACAAGGAATTTCAATAATAAAGCACAGACTCCAACAAAAAAAGGTTCTTTTGATTCTAGATGATGTTGATAAAATAGAACAACTGGAGGCCTTGGTTGGAGGATTCTATTGGCTTGGTTCTGGAAGCAGAGTTATTATTACAACTAGGGACAAACATTTGTTGTCAAGTCACGGGGTTAAGAGAACATATGAAGTAAATGTGTTAAACGAGAAAGATGCTCTTCGGTTGCTTACATGGAAAGCTTTTAAAACAGAAGTATTTCATCCTAGTTATTTTGATGTCTTGAAGCGTGCAGTAGGTTATGCTTCTGGACTTCCATTGGCTTTGATAGTTATTGGTTCCAATTTATTTGGAAAGAATATACAAGAATGGGAATCTGCATTACATCGATATGAAATCATTCCAAATAAAGAGATCCAAAATATACTCAAAGTAAGTTTTGATGCTTTGGAGGAAGATGAGAAAAGTGTTTTTCTTGACATGGCTTGTATCTACATAGGAAAAGAGTATCAATTGGCAAATATGGAAAATATGCTTTATGCTCATTTTGATGCTTGCATGAAATATCATATTGGAGTATTGGTTGAAAAATCTCTCATAAAGATTAGTTGGACAGGTAAGTACATTGTACATGACTTGATTGGGGACATGGCTAAAGAAATTGTTAGATTGGAATCACCAGACGAACCTGGAAAACGTAGTCGATTATGGTTTCACGAAGATATAATTCAAGTTTTAGAAGACAATTCAGGGACAAGCGCGATTAAATCCATATACCTGATGGAGTGTGATGATGAGGTAGAATTGGATGAATCGGCCTTCAAGAATATGAAAAACCTAAAAACACTTATTATCAAAGGTGGCCATTTCTCCAAAGGACCCAAACATCTTCCAAATAGTTTAAGAGTAGTGGAATGGTGGAATTATCCTTCAGAATATTTTCCATATGATTTTAATCCAAAGAAACTTGCCATATTCGAGTTACCAAAAAGTAGCTTAATGTCACTCAAGTTGACTGACTTAATGAAGAAGTTCTTGAATATGAAGATTTTGAATTTTGATGACGCGGAATTTTTAACAGAAATACCTGATACATCTTCTCTTTTAAATTTAGAATTATTTTCATTTAAACGTTGTAAGAATTTAACTACAATTCACGAATCGGTTGGGTTCTTGGAAAAACTTAAGGTCTTGAGTGCCCAAGGTTGCCGTAAGCTTAGGAAATTTCCACCTATCAAATTGATATCCCTTGAAGAACTCAATGTTTCATTTTGCACAAATCTCGAGAGTTTTCCAGAAATATTAGGAAAGATGGAAAATATGAAAAACCTTGTGTTGGAGGAAACTTCCTTTAAAGAAATGCCAAATTCATTTCAAAATCTCACTCATCTCCAAACATTGCAGCTGCGTTGTTGTGGAGTGTTCAAGTTGCCAAGTTGCATTCTCACGATGCCAAAACTAGTTGAAATAATTGGCTGGGTTTCAGAAGGATGGCAATTCCCAAAATCAGATGAGGCTGAAGATAAAGTGAGCTCAATGGTTCCTTCAAACGTAGAATCTCTTCGTCTTACATTCTGCAATCTCTCAGATGAATTTGTTCCAATAATTCTCACATGGTTTGTTAATGTGAAAGAATTACACTTAGCCCATAATAATTTCACAATTCTCCCAGAATGCATAAAAGAATGTCATTTGTTAAGGGTACTTTGCGTGGATGAATGCCATTATCTTCAAGAAGTTAGAGGAATAGCGCCAAACTTGAAAATATTGTATGCACGAGGATGCAAATCTTTGACCTGTACAGAAATGTTTATGAATCAGGAATTGCATGAAGCTGGAAGTACCATGTTTTATTTGCCAAGATCAAGAATTCCAGATTGGTTTGAGCACTGTAGCAGCAATGGGTCAAGTTTCTTTTGGTTCCGTAACAAGTTCCCTGCTATAGCACTTTGTCTTGTTCCCAGTTCGATATTTGTCGAATCTACAATCTATCCCATCGTGATCATCAATGGCAATGAATGTAAACTTGACTCTAGGGACAGATTTCCCCATTTGTCCGTTGAACCAGATCATACATATATTTTTGATCTTCAAATGATAAAATTCGAAGATAATTTGGATGAAGCACTTTTAGAAGATGAATGGAACCATGTGGAGATTATGTATCAAGGTGAAAACAATGCCCTAGTCCCCATTGAAAGTGGAATCCATGTATTCAAACAGAAGTGTATCACAGATGATATTCGATTCACGGACCCTTGA 3120 0.3635 MAFRESSSSSSSFFSYGFTYDVFLSFRGLDTRYGFTGNLYKALYDKGIHTFIDDEELQRGHEITPSLLEAIEESRIAIIVLSKNYASSSFCLHELVKILDCIKGKGRLVWPIFYDVDPSDVRKQTGSYGEALAMLGERFNDNNLQIWKNALQQVANLSGWHFKIGDGYEYEFIGKIVEHVSKKMNRVALPVADYPVGLEPQVLEINSLLDIGSDDEVNMIGIHGSGGIGKTTLALAVYNLIADHFEALCFLENVRENSNKHGLQHLQKILLSETLGEKKIKLTSVKQGISIIKHRLQQKKVLLILDDVDKIEQLEALVGGFYWLGSGSRVIITTRDKHLLSSHGVKRTYEVNVLNEKDALRLLTWKAFKTEVFHPSYFDVLKRAVGYASGLPLALIVIGSNLFGKNIQEWESALHRYEIIPNKEIQNILKVSFDALEEDEKSVFLDMACIYIGKEYQLANMENMLYAHFDACMKYHIGVLVEKSLIKISWTGKYIVHDLIGDMAKEIVRLESPDEPGKRSRLWFHEDIIQVLEDNSGTSAIKSIYLMECDDEVELDESAFKNMKNLKTLIIKGGHFSKGPKHLPNSLRVVEWWNYPSEYFPYDFNPKKLAIFELPKSSLMSLKLTDLMKKFLNMKILNFDDAEFLTEIPDTSSLLNLELFSFKRCKNLTTIHESVGFLEKLKVLSAQGCRKLRKFPPIKLISLEELNVSFCTNLESFPEILGKMENMKNLVLEETSFKEMPNSFQNLTHLQTLQLRCCGVFKLPSCILTMPKLVEIIGWVSEGWQFPKSDEAEDKVSSMVPSNVESLRLTFCNLSDEFVPIILTWFVNVKELHLAHNNFTILPECIKECHLLRVLCVDECHYLQEVRGIAPNLKILYARGCKSLTCTEMFMNQELHEAGSTMFYLPRSRIPDWFEHCSSNGSSFFWFRNKFPAIALCLVPSSIFVESTIYPIVIINGNECKLDSRDRFPHLSVEPDHTYIFDLQMIKFEDNLDEALLEDEWNHVEIMYQGENNALVPIESGIHVFKQKCITDDIRFTDP* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2400 1039 Gene3D - 17 181 IPR035897 -
Mtr8g2400 1039 SMART AAA_5 216 354 IPR003593 -
Mtr8g2400 1039 Pfam NB-ARC domain 212 418 IPR002182 GO:0043531
Mtr8g2400 1039 PRINTS Disease resistance protein signature 219 234 - -
Mtr8g2400 1039 PRINTS Disease resistance protein signature 295 309 - -
Mtr8g2400 1039 PRINTS Disease resistance protein signature 388 402 - -
Mtr8g2400 1039 PRINTS Disease resistance protein signature 676 692 - -
Mtr8g2400 1039 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 22 916 - -
Mtr8g2400 1039 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 160 IPR035897 -
Mtr8g2400 1039 Gene3D Ribonuclease Inhibitor 529 711 IPR032675 -
Mtr8g2400 1039 SMART till_3 19 157 IPR000157 GO:0007165
Mtr8g2400 1039 Pfam TIR domain 20 185 IPR000157 GO:0007165
Mtr8g2400 1039 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 916 IPR044974 GO:0006952
Mtr8g2400 1039 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 446 IPR027417 -
Mtr8g2400 1039 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Mtr8g2400 1039 Gene3D - 353 437 IPR042197 -
Mtr8g2400 1039 Gene3D - 182 347 IPR027417 -
Mtr8g2400 1039 Gene3D Ribonuclease Inhibitor 712 919 IPR032675 -
Mtr8g2400 1039 SUPERFAMILY L domain-like 514 889 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2400 Mtr-Chr8 34371813 34378400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2400 14 755 WRKY Transcription Factor Family AT4G12020 30.469 1.98e-76 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2400 - - gmx:100780257 1239.94