Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2398 ATGGGTTCTATTGGAATTGAGAGTTCAAAAACTGAGGTTGTCACTGTTGATGTGCTTGCAACCAAGTCTCTGATCAAGACCACCCATGTTTATCTTGATGTCAGGACGGTGGAAGAGTTTCAGAAAGGGCACGTAGATTCAGAGAAGATCATTAACATTGCATACATGTTCAATACACCCGAGGGGAGGGTGAAGAACCCAGAGTTTCTGAAGGAAGTTTCGTCTCTTTGCAATAAAGAAGATCACCTCATAGTGGGTTGCCAAAGTGGAGTGAGATCTGTGTATGCAACTGCTGATCTTCTAGCTGAAGGGTTTAAGGATGTGTACAACATGGGAGGAGGTTATCTAGAGTGGGTTAAAAAGGAGTTTCCAGTGAAGATACATGTGACCGAATAG 396 0.4318 MGSIGIESSKTEVVTVDVLATKSLIKTTHVYLDVRTVEEFQKGHVDSEKIINIAYMFNTPEGRVKNPEFLKEVSSLCNKEDHLIVGCQSGVRSVYATADLLAEGFKDVYNMGGGYLEWVKKEFPVKIHVTE* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2398 131 CDD RHOD 30 119 - -
Mtr8g2398 131 Gene3D - 5 127 IPR036873 -
Mtr8g2398 131 PANTHER THIOSULFATE SULFURTRANSFERASE 18 8 127 IPR044684 GO:0003824
Mtr8g2398 131 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 12 125 IPR036873 -
Mtr8g2398 131 ProSiteProfiles Rhodanese domain profile. 29 127 IPR001763 -
Mtr8g2398 131 Pfam Rhodanese-like domain 29 120 IPR001763 -
Mtr8g2398 131 PANTHER THIOSULFATE SULFURTRANSFERASE 18 8 127 - -
Mtr8g2398 131 SMART rhod_4 16 124 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2398 Mtr-Chr8 34364716 34366544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2398 3 125 Sulfurtransferasese or Rhodanese AT5G66170 56.098 3.23e-50 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2398 - K15692 cam:101497130 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2398 8 34364716 34366544 Mtr8g2398 8 34364716 34366544 ECH
Mtr5g0888 5 8843075 8844669 Mtr8g2398 8 34364716 34366544 PCT
Mtr5g0933 5 9233341 9235072 Mtr8g2398 8 34364716 34366544 PCT