Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2385 ATGATGAAGCTTTTCACTCTTATTAAATATTTTTATGTCTGTCCTTTTCTGGTTTTGTTTTATCCATTTGATGTGACAGCTACATTTGATGAACCTCCTTATAAAAACCATTCATTTCCTGCTGTTATAGCATTTGGTGATTCGATCTTGGATACTGGCAACAACAACTATCTTTCAACAATAGTGAAGGCAGATTTCAAACCGTACGGGAGGGATTTTATTGGAGGAAAAGCAACAGGAAGGTTTTGCAATGGAAAAGTCCCTTCAGATGTTTTTCTTGAATACCTTGGTATAAAGGAGGCCATGCCACCTTATCTTGATCCAAATTTGAGTACTGAAGACCTCTTAACTGGAGTGTGTTTTGCATCTGCTGGTTCAGGATATGATCCTCTTACAATTGAACTAGGATCGGTGTTATCAGCAGAGGATCAACTAGAAATGTTCAAAGAGTATATAGGAAAACTGAAGGAAGCTGTGGGGGAAAATAGGACAGCTGAGATTATAGCAAATAGCATGCTTATCATAAGCATGGGAACCAATGATATTGCAGGAACATATTATCTGTTGGCACCATTCAGACAGCTTGAATATGATATAGAAAATTATACAAGCATGCTGGTCAGTGCAAATTCAAAATTTGTTGAGGATCTTTATCTATTGGGAGCAAGAAGGATTGGAATATTCAGTTTATCACCAATAGGATGTGTGCCACTGCAAAGAACCATAAAAGGAGGCCTATCAAGGGAATGTGTAGAGATTTTAAATGAGGGAGCATTGATCTATAACGCCAAGCTTTCCACTTCAATTTTAGATTTAGCAAGAAAACTTCCAGATTCAAGGCTTGTCTACCTTGAGAACTTTAGTCAATTGCATGACATTATCATAAACCACAATGACTATGGATTTGAAAATGGGGATGGTTCATGCTGTGGCATTGCAAATATAGAACTTGGTCCTCTCTGTAGTTCTTTCACCTTGAAAGTGTGTAATGATACCTCTCAATATGTGTTCTGGGACAGTTACCATCCCACAGAGAAAGCTTACAAAATACTTGTCAAAGAAATCTTAGATAAGAAGCTCGATGAGTTTGTTTGA 1095 0.3735 MMKLFTLIKYFYVCPFLVLFYPFDVTATFDEPPYKNHSFPAVIAFGDSILDTGNNNYLSTIVKADFKPYGRDFIGGKATGRFCNGKVPSDVFLEYLGIKEAMPPYLDPNLSTEDLLTGVCFASAGSGYDPLTIELGSVLSAEDQLEMFKEYIGKLKEAVGENRTAEIIANSMLIISMGTNDIAGTYYLLAPFRQLEYDIENYTSMLVSANSKFVEDLYLLGARRIGIFSLSPIGCVPLQRTIKGGLSRECVEILNEGALIYNAKLSTSILDLARKLPDSRLVYLENFSQLHDIIINHNDYGFENGDGSCCGIANIELGPLCSSFTLKVCNDTSQYVFWDSYHPTEKAYKILVKEILDKKLDEFV* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2385 364 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 363 - -
Mtr8g2385 364 Gene3D SGNH hydrolase 32 359 IPR036514 -
Mtr8g2385 364 PANTHER GDSL ESTERASE/LIPASE EXL3 2 363 - -
Mtr8g2385 364 SUPERFAMILY SGNH hydrolase 159 357 - -
Mtr8g2385 364 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 42 53 IPR008265 GO:0006629|GO:0016298
Mtr8g2385 364 Pfam GDSL-like Lipase/Acylhydrolase 42 355 IPR001087 GO:0016788
Mtr8g2385 364 CDD SGNH_plant_lipase_like 40 358 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2385 Mtr-Chr8 34258531 34260808 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2385 36 357 Pollen Coat Proteome AT1G75910 41.104 2.16e-81 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2385 - - mtr:MTR_8g075200 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0902 5 8957512 8960664 Mtr8g2385 8 34258531 34260808 PCT