LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr8g2384	ATGAAGTCACTCTTTCAAGTAATTTGTTGGTGTTCTACCATAGCCATCATCTTACAACATGTTTCTTCTGTGAGTCTACCTTTACCAAACAATGAAACAGTGCCAGCAGTTTTTGTATTTGGTGACTCTATAGTTGATCCAGGAAATAACAACTATATCAGCACTCTTATCAAATGTGATTTTCCACCATATGGTAGAGATTTTGATGGAGGAGTTCCAACTGGCAGGTTCAGCAATGGTTTAGTCCCATCAGACCTTGTTGCTGAAAAATTTGGAGTCAAGAAATTTTTACCTGCTTATCTTGATCCTAATATACAACTTCCTGATCTCCTTACTGGTGTAAGCTTTGCCTCAGGTGGTTCTGGATATGATCCTCTAACCGCACAAATAACGAGTGTGAAATCATTATCAGATCAATTGGACATGTTCAAGGGATACATGAAGAAGATAGATGAAGCAATTGGAAGAGAGGAAAGGGCATTGATAGTATCAAAGAGCATATACATAGTGTGCATAGGAAGTGATGACATTGCTAATACTTATGCTCAAACACCATTTCGACGTTTTCAGTATGATATTCAATCATACACAGATTTCATGGCTTATGAAGCCTCAAAATTCTTGCAGGAACTATACAGACTAGGAGGTAGAAGGATTGGAGTATTTGATGTACCAGTTATAGGGTGTGTGCCCTCACAAAGAACACTTGGTGGAGGCATTTTTAGAGAATGTTCAAATTCTTCTAATCAAGCAGCAATGCTCTTCAATTCTAAGCTTTTCAAAGAAATGAGGGCACTTGGAAAAGAGTACTCAGATGCTAGATTTGTCTCTCTTGAAACTTACAATCCATTCATGGACATCATTCAAAATCCTTCTAAATATGGTTTTAATGAGACAGAGAAAGGATGCTGTGGTACAGGGAATATAGAAGTTGGAATTTTGTGCAACCCTTACAGCATAAACACATGTTCAAATCCTTCAGATTACGTATTTTGGGACAGTTATCATCCTACAGAGAAAGCTTACAATGTGCTTAGTTCACTTGTACTTGATAAAAAAATCAAGGACTTCTTCTCTACATTTGATGAACCTCCTTATAAAAACCATTCATTTCCTGCTGTTATAGCATTTGGTGATTCGATCTTGGATACTGGCAACAACAACTATCTTTCAACAATAGTGAAGGCAGATTTCAAACCGTACGGGAGGGATTTTATTGGAGGAAAAGCAACAGGAAGGTTTTGCAATGGAAAAGTCCCTTCAGATGTTTTTCTTGAATACCTTGGTATAAAGGAGGCCATGCCACCTTATCTTGATCCAAATTTGAGTACTGAAGACCTCTTAACTGGAGTGTGTTTTGCATCTGCTGGTTCAGGATATGATCCTCTTACAATTGAACTAGGATCGGTGTTATCAGCAGAGGATCAACTAGAAATGTTCAAAGAGTATATAGGAAAACTGAAGGAAGCTGTGGGGGAAAATAGGACAGCTGAGATTATAGCAAATAGCATGCTTATCATAAGCATGGGAACCAATGATATTGCAGGAACATATTATCTGTTGGCACCATTCAGACAGCTTGAATATGATATAGAAAATTATACAAGCATGCTGGTCAGTGCAAATTCAAAATTTGTTGAGGATCTTTATCTATTGGGAGCAAGAAGGATTGGAATATTCAGTTTATCACCAATAGGATGTGTGCCACTGCAAAGAACCATAAAAGGAGGCCTATCAAGGGAATGTGTAGAGATTTTAAATGAGGGAGCATTGATCTATAACGCCAAGCTTTCCACTTCAATTTTAGATTTAGCAAGAAAACTTCCAGATTCAAGGCTTGTCTACCTTGAGAACTTTAGTCAATTGCATGACATTATCATAAACCACAATGACTATGGATTTGAAAATGGGGATGGTTCATGCTGTGGCATTGCAAATATAGAACTTGGTCCTCTCTTTTTGTTTTATCCATTTGTTGTGACAGCTACATTTGATGAACCTCCTTATAAAAACCATTCATTTCCTGCTGTTATGGCATTTGGTGATTCAATCTTGGATACTGGCAACAACAATTATATTTCAACAATAGTGAAGGCGAATTTCAAACCGAATGGGAGGGATTTTATTGGAGGAAAAGCGACAGGAAGGTTTTGCAATGGAAAAATCCCTTCAGATGTTTTTCTTGAATACCTTGGTATTAAGGAGGCCATGCCACCTTATCTTGATCCAAATTTGAGTACTGAAGACCTCTTAACTGGAGTGTGTTTTGCATCTGCTGGTTCAGGATATGATCCTCTTACAATTGAACTAGCAGAAGTGTTGTCAGCAGAGGATCAACTAGAAATGTTCAAAGAGTATATAGGAAAACTGAAGGAAGCTGTGGGGGAAAATAGGACAGCTGAGATTATAGCAAATAGCATGCTTATCATAAGCATGGGAACCAATGATATTGCAGGAACATATTATCTGTCACCATTCAGAAAGCATGAATATGATATAGAAAAGTATACGAGCTTGCTGGTCAGTGCAAATTCAAAATTTGTTGAGGATCTTTATCTATTGGGAGCAAGAAGAATTGGAATATTCAGTTTATCACCAGTAGGATGTGTGCCATTCCAAAGAACTGTAAAAGGAGGCCTATTAAGGGAATGTGTAGAGATTGTAAATGAGGGAGCATTGATCTTTAACTCCAAGCTTTCCTCTTCCATTATAGATCTAGCAAAAAAACATCCAGATTCCAGGCTTGTCTACCTTGAGAACTTTAGTCAACTGCATGACATTATCATAAACCACAATGACTATGGATTTGAAAATGGGGATGCTTCATGCTGTGGCATTGCAAATATAGAACTTGGTCCTCTCTGTAGTTCTTTCACCTTAAAAGTGTGTAATGATACCTCTCAATATGTGTTCTGGGACAGTTATCATCCCACAGAGAAAGCTTACAAAATACTTGTTAAAGAAATCTTAGAAAAGAAGCTTGATGAGTTTGTTTGA	2997	0.3754	MKSLFQVICWCSTIAIILQHVSSVSLPLPNNETVPAVFVFGDSIVDPGNNNYISTLIKCDFPPYGRDFDGGVPTGRFSNGLVPSDLVAEKFGVKKFLPAYLDPNIQLPDLLTGVSFASGGSGYDPLTAQITSVKSLSDQLDMFKGYMKKIDEAIGREERALIVSKSIYIVCIGSDDIANTYAQTPFRRFQYDIQSYTDFMAYEASKFLQELYRLGGRRIGVFDVPVIGCVPSQRTLGGGIFRECSNSSNQAAMLFNSKLFKEMRALGKEYSDARFVSLETYNPFMDIIQNPSKYGFNETEKGCCGTGNIEVGILCNPYSINTCSNPSDYVFWDSYHPTEKAYNVLSSLVLDKKIKDFFSTFDEPPYKNHSFPAVIAFGDSILDTGNNNYLSTIVKADFKPYGRDFIGGKATGRFCNGKVPSDVFLEYLGIKEAMPPYLDPNLSTEDLLTGVCFASAGSGYDPLTIELGSVLSAEDQLEMFKEYIGKLKEAVGENRTAEIIANSMLIISMGTNDIAGTYYLLAPFRQLEYDIENYTSMLVSANSKFVEDLYLLGARRIGIFSLSPIGCVPLQRTIKGGLSRECVEILNEGALIYNAKLSTSILDLARKLPDSRLVYLENFSQLHDIIINHNDYGFENGDGSCCGIANIELGPLFLFYPFVVTATFDEPPYKNHSFPAVMAFGDSILDTGNNNYISTIVKANFKPNGRDFIGGKATGRFCNGKIPSDVFLEYLGIKEAMPPYLDPNLSTEDLLTGVCFASAGSGYDPLTIELAEVLSAEDQLEMFKEYIGKLKEAVGENRTAEIIANSMLIISMGTNDIAGTYYLSPFRKHEYDIEKYTSLLVSANSKFVEDLYLLGARRIGIFSLSPVGCVPFQRTVKGGLLRECVEIVNEGALIFNSKLSSSIIDLAKKHPDSRLVYLENFSQLHDIIINHNDYGFENGDASCCGIANIELGPLCSSFTLKVCNDTSQYVFWDSYHPTEKAYKILVKEILEKKLDEFV*	999

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr8g2384	998	Pfam	GDSL-like Lipase/Acylhydrolase	37	348	IPR001087	GO:0016788
	Mtr8g2384	998	Pfam	GDSL-like Lipase/Acylhydrolase	374	645	IPR001087	GO:0016788
	Mtr8g2384	998	Pfam	GDSL-like Lipase/Acylhydrolase	677	989	IPR001087	GO:0016788
	Mtr8g2384	998	ProSitePatterns	Lipolytic enzymes "G-D-S-L" family, serine active site.	374	385	IPR008265	GO:0006629\|GO:0016298
	Mtr8g2384	998	PANTHER	GDSL ESTERASE/LIPASE EXL3	359	652	-	-
	Mtr8g2384	998	PANTHER	GDSL ESTERASE/LIPASE EXL3	4	357	-	-
	Mtr8g2384	998	PANTHER	GDSL ESTERASE/LIPASE EXL3	652	997	-	-
	Mtr8g2384	998	CDD	SGNH_plant_lipase_like	372	660	IPR035669	-
	Mtr8g2384	998	ProSitePatterns	Lipolytic enzymes "G-D-S-L" family, serine active site.	677	688	IPR008265	GO:0006629\|GO:0016298
	Mtr8g2384	998	CDD	SGNH_plant_lipase_like	35	352	IPR035669	-
	Mtr8g2384	998	Gene3D	SGNH hydrolase	364	656	IPR036514	-
	Mtr8g2384	998	Gene3D	SGNH hydrolase	27	354	IPR036514	-
	Mtr8g2384	998	Gene3D	SGNH hydrolase	667	994	IPR036514	-
	Mtr8g2384	998	PANTHER	GDSL-LIKE LIPASE/ACYLHYDROLASE	359	652	-	-
	Mtr8g2384	998	PANTHER	GDSL-LIKE LIPASE/ACYLHYDROLASE	652	997	-	-
	Mtr8g2384	998	PANTHER	GDSL-LIKE LIPASE/ACYLHYDROLASE	4	357	-	-
	Mtr8g2384	998	CDD	SGNH_plant_lipase_like	675	992	IPR035669	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr8g2384	Mtr-Chr8	34253614	34266415	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr8g2384	671	991	Pollen Coat Proteome	AT1G75910	39.877	4.19e-74	246

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr8g2384	-		-	ahf:112723705	894.804