Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2380 ATGATGTCTCATCAACCTCTACAAGAACAAACCCCACAACAACAACAACACCATCTTCGACCAAACAAACCCCCCAAAAATACCATGGAAGATGTTTGGAAAGACATCAACCTCCCTTCCTTAACCAACCACATGAGTAACACAGTCTCTTCTCCCTCCTTAATGACACCATCTTCTCTTCACTCCACCATCAACCTTAACTCTCTACCCGAGTTTCATTTCGACCCTCTTGCACACAATGACTTGCAACTAGAGCAAAATCACCACCACACTACTACTCTCTCAAAGGTTGAAGCATTATTAAGCAACTCAATAGAGAGACGACATAAGCGAATAATGAAGAATAGAGAATCTGCTGCACGATCAAGAGCTAGAAAACAGGCTTATATATTTGAGTTGAAGAAAAAAGTCAAGAGCTTGGAAGAAGAGAATGCCAGACTTAAAAGACAGCAACATGTTTGTTTTCTCCTCTCTCCTTGTTACTACTGTGTGATACCGCAAGCAATCATAAGCAAAAGAGGAAGGGAAATCTGTATCGAACATCAACAGCTCCATTTTAAGAACTACTATTTATAG 576 0.4028 MMSHQPLQEQTPQQQQHHLRPNKPPKNTMEDVWKDINLPSLTNHMSNTVSSPSLMTPSSLHSTINLNSLPEFHFDPLAHNDLQLEQNHHHTTTLSKVEALLSNSIERRHKRIMKNRESAARSRARKQAYIFELKKKVKSLEEENARLKRQQHVCFLLSPCYYCVIPQAIISKRGREICIEHQQLHFKNYYL* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2380 191 Gene3D - 105 154 - -
Mtr8g2380 191 PANTHER PROTEIN FD 21 155 - -
Mtr8g2380 191 Coils Coil 123 150 - -
Mtr8g2380 191 MobiDBLite consensus disorder prediction 1 30 - -
Mtr8g2380 191 CDD bZIP_plant_BZIP46 107 152 - -
Mtr8g2380 191 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 21 155 IPR043452 GO:0003700|GO:0045893
Mtr8g2380 191 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 105 150 IPR004827 GO:0003700|GO:0006355
Mtr8g2380 191 SUPERFAMILY Leucine zipper domain 107 152 IPR046347 GO:0003700|GO:0006355
Mtr8g2380 191 MobiDBLite consensus disorder prediction 1 22 - -
Mtr8g2380 191 Pfam bZIP transcription factor 107 149 IPR004827 GO:0003700|GO:0006355
Mtr8g2380 191 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 110 125 IPR004827 GO:0003700|GO:0006355
Mtr8g2380 191 SMART brlzneu 103 158 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2380 Mtr-Chr8 34228840 34230321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2380 100 157 bZIP Transcription Factor Family AT3G56850 60.345 5.94e-16 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr8g2380 bZIP_1 8.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2380 K14432 - gmx:102667912 108.227