Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2375 ATGGGTAAGAAAAAGTCAGAGGATGCAGGTCCATCTACAAAGGCTAAACCAGGTAGCAAAGATGTTTCTAAGAAGGAAAAATTTTCTGTCTCTGCCATGTTGGCAGGTATGGATGAAAAAGCTGATAAGCCTAAAAAGGCATCTTCGAATAAGGCGAAGCCAAAACCTGCCCCGAAAGCTTCTGCATACACTGATGATATTGATCTTCCTCCCTCTGATGATGATGAGTCTGAAGAGGAGCAAGAGGAAAAGCATAGGCCAGATTTGAAGCCACTTGAGGTGTCTATTGCTGAAAAAGAGTTGAAAAAGCGAGAAAAGAAAGATATTTTAGCTGCCCATGTGGCTGAACAGGCAAAGAAGGAAGCTCTTAGGGATGATCGTGATGCTTTCACTGTTGTAATTGGAAGTCGGGCTTCAGTGCTTGATGGAGACGATGGTGCTGATGCTAATGTCAAAGATATAACGATAGAAAATTTTTCTGTGGCTGCTCGGGGTAAAGAACTTCTGAAGAATACTTCAGTGAAGATATCCCATGGAAAACGTTATGGTTTGATTGGGCCGAATGGAATGGGCAAGTCAACGCTTTTGAAGCTTCTTGCTTGGAGGAAGATACCGGTACCTAAGAATATTGATGTCCTTCTGGTTGAGCAGGAGGTAGTTGGTGATGATAAAACAGCGCTTGAAGCTGTTGTTTCAGCTAATGTTGAACTTATTAAAGTTCGACAAAAAGTTGCTGATCTACAAAATATAGCTTCTGGTGAAGAAGGCATGGATAAAGATGATACTAATGAGGAAGAGGATGCGGGAGAAAAGCTAGCAGAGCTGTATGAACAATTACAACTGATGGGGTCTGATGCTGCTGAATCTCAAGCGTCAAAGATTTTAGCTGGTCTGGGTTTTACAAAGGACATGCAGGGCCGTCCTACAAAATCCTTTAGTGGCGGCTGGAGGATGAGAATTTCTTTAGCTCGAGCACTTTTTGTGCAGCCCACTCTATTATTGCTTGATGAACCCACTAATCATCTTGACTTGAGGGCTGTTCTGTGGCTAGAAGAGTACTTGTGTCGTTGGAAGAAAACTTTGGTGGTTGTATCACACGATAGAGATTTTCTCAATACAGTGTGCTCTGAGATTATTCACCTGCATGATTTGAAACTTCATTTCTATCGTGGAAATTTTGATGCTTTTGAGAGTGGGTATGAACAGCGTCGTAGAGAAGCGAATAAGAAGTATGAGATTTTTGACAAGCAATTGAAAGCAGCTAGAAGAACCGGGAACAAGGCTCAACAAGATAAGGTGAAGGACCGAGCTAAGTTCGCAGCAGCTAAGGAATCGAAAAGCAAAAGCAAGGGAAAGGTTGATGAGGATGAGACCCAAGTAGAGGTACCACACAAGTGGAGGGACTACAGCGTGGAGTTCCACTTTCCTGAACCTACTGAACTCACACCTCCACTTCTGCAGCTTATTGAAGTGAGCTTCAGTTACCCAAACCGAGAGGATTTTAGGCTCTCAGATGTTGATGTTGGCATTGATATGGGGACTCGTGTTGCCATCGTTGGGCCTAATGGTGCTGGAAAATCTACACTGCTGAATCTTCTAGCTGGTGATTTGGTTCCAAGTGAAGGTGAAGTTCGAAGAAGCCAGAAGTTGAGGATAGGGAGATATTCCCAACACTTTGTGGACCTACTAACAATGGATGAAACACCTGTTCAGTACCTTCTTCGTCTCCATCCAGACCAGGAGGGGCTTAGTAAGCAAGAGGCTGTTCGTGCAAAACTTGGTAAATATGGGCTACCTAGTCATAACCATCTTACCCCCATTGTCAAACTATCAGGAGGGCAGAAAGCTCGGGTGGTATTCACATCGATATCCATGTCAAGACCTCACATTTTATTGTTAGATGAACCTACAAATCATCTGGATATGCAAAGTATTGATGCATTGGCTGATGCGCTGGATGAATTCACTGGTGGAGTTGTTCTTGTTAGTCATGATTCTAGATTGATATCACGTGTCTGTGATGATGAAGAACGGAGTCAAATATGGGTTGTTGAAGATGGCACCGTCAGAAATTTCCCTGGAACATTTGAGGATTACAAGGAAGATCTGCTGAAAGAGATTAAAGCTGAAGTTGATGATTGA 2142 0.4304 MGKKKSEDAGPSTKAKPGSKDVSKKEKFSVSAMLAGMDEKADKPKKASSNKAKPKPAPKASAYTDDIDLPPSDDDESEEEQEEKHRPDLKPLEVSIAEKELKKREKKDILAAHVAEQAKKEALRDDRDAFTVVIGSRASVLDGDDGADANVKDITIENFSVAARGKELLKNTSVKISHGKRYGLIGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANVELIKVRQKVADLQNIASGEEGMDKDDTNEEEDAGEKLAELYEQLQLMGSDAAESQASKILAGLGFTKDMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCSEIIHLHDLKLHFYRGNFDAFESGYEQRRREANKKYEIFDKQLKAARRTGNKAQQDKVKDRAKFAAAKESKSKSKGKVDEDETQVEVPHKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKYGLPSHNHLTPIVKLSGGQKARVVFTSISMSRPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSQIWVVEDGTVRNFPGTFEDYKEDLLKEIKAEVDD* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2375 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 465 698 IPR027417 -
Mtr8g2375 713 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 5 713 - -
Mtr8g2375 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 405 IPR027417 -
Mtr8g2375 713 CDD ABCF_EF-3 486 688 - -
Mtr8g2375 713 Gene3D - 448 712 IPR027417 -
Mtr8g2375 713 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 486 711 IPR003439 GO:0005524
Mtr8g2375 713 CDD ABCF_EF-3 154 385 - -
Mtr8g2375 713 MobiDBLite consensus disorder prediction 422 459 - -
Mtr8g2375 713 PANTHER - 5 713 - -
Mtr8g2375 713 ProSitePatterns ABC transporters family signature. 312 326 IPR017871 GO:0005524
Mtr8g2375 713 SMART AAA_5 512 688 IPR003593 -
Mtr8g2375 713 SMART AAA_5 178 384 IPR003593 -
Mtr8g2375 713 Gene3D - 152 438 IPR027417 -
Mtr8g2375 713 Pfam ABC transporter 169 340 IPR003439 GO:0005524
Mtr8g2375 713 Pfam ABC transporter 503 638 IPR003439 GO:0005524
Mtr8g2375 713 Coils Coil 404 424 - -
Mtr8g2375 713 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 154 415 IPR003439 GO:0005524
Mtr8g2375 713 MobiDBLite consensus disorder prediction 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2375 Mtr-Chr8 34182014 34187732 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2375 486 689 Calmodulin-binding Proteins AT2G36910 26.222 1.58e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2375 K06184 - gmx:100806865 1144.8