Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2370 ATGGTTGATGGAAAAAATGCATCTGCACAACATATGTTGGTGGGATTTATTGTAGGCATTTCAACAGTTATGGCACTGGCCATATTGTTCTACCTCTTTTGGAAAAGGATCATTCCATTTCTTAAGCAACCTAAGGCTTTGAAAGGAAAGGAGTATAAAAGCTCGAAATACGACAAAATATCTTTAAGGTGTTTTACTATTGAGGAACTAGAGAGAGCTACCAAAAATTTTAGTCAAGATTGCTTATTGGGTTCTGGTGCATTTTGTAATGTCTATAAGGGAATTTTTGAGTTAGAAGGAATACTAGCCATAAAGAGACCTCATTCTGAATCATTCTTAAGTGTTGAGGAATTTAGAAATGAAGTTAGGCTTCTTTCAGCAGTAAAGCACAAGAATCTTATTGGTCTGGTTGGATATTGTGAAGAACCAGAACGAGATGGAGCAAAAATACTAGTTTATGAATATGTACCAAATGGTTCACTCTTGGAATACATGATGGGAAACAGAAGGAGAAGCTTAACGTGGAAGCAAAGAATAAACATAGCAATTGGAGCAGCTAAAGGCATAGCTTATTTGCATGAAAAGGTGAAGCCAAGCATAATCCATCGTGACATCAAACCTAGTAACATACTATTAGGAGAAAGTTTTGAGGCCAAGGTTTCAGATTTTGGGCTGGTAAAATCAGGTCCTACTGGTGATCAATCACATGTCAGTAGCCAAATCAAAGGGACACCAGGGTACCTTGACCCTGCATATTGTTCAAGCTGCCATTTGACCAAATTTAGTGATGTGTATAGCTTTGGTGTCATACTTTTGCAACTTATTTCAGCTAGACCTGCAGTAGATAATGCTGAAAACCCAAGTAACCAACATATTATTGATTGGGCAAGACCTAGCATAGAGAAAGGTATCATTGCAGAAATCATGGATGCAAATCTATTTTGTCAGAGTGAGCCATGCAATATGGAAGTTATGTTAAAGGTGGGGCAACTTGGTATAAGATGTGTGGCTCAAGAACCAAAACATCGCCCCACAATGACCCAAGTCTGTAGAGAACTAGAACATGCCCTCTACTCAGATGATAGCTTCACTAACAAGGATTCAGAAACCCTTGGATCGGTGCAACACTGTGATTTTTCACAGGGATTTGTGAGCATAGAAGGTGTTCGACTTGAGAAATTTCATATTGACATGGACAGCTTCTCCTTCAAGAGCATAAACTTAAGGTGCCTGGAAAATAATAGTATTAGTATTGACATTGACAAGAACAATTTGACATGA 1281 0.3825 MVDGKNASAQHMLVGFIVGISTVMALAILFYLFWKRIIPFLKQPKALKGKEYKSSKYDKISLRCFTIEELERATKNFSQDCLLGSGAFCNVYKGIFELEGILAIKRPHSESFLSVEEFRNEVRLLSAVKHKNLIGLVGYCEEPERDGAKILVYEYVPNGSLLEYMMGNRRRSLTWKQRINIAIGAAKGIAYLHEKVKPSIIHRDIKPSNILLGESFEAKVSDFGLVKSGPTGDQSHVSSQIKGTPGYLDPAYCSSCHLTKFSDVYSFGVILLQLISARPAVDNAENPSNQHIIDWARPSIEKGIIAEIMDANLFCQSEPCNMEVMLKVGQLGIRCVAQEPKHRPTMTQVCRELEHALYSDDSFTNKDSETLGSVQHCDFSQGFVSIEGVRLEKFHIDMDSFSFKSINLRCLENNSISIDIDKNNLT* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2370 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Mtr8g2370 426 CDD STKc_IRAK 83 354 - -
Mtr8g2370 426 SUPERFAMILY Protein kinase-like (PK-like) 54 354 IPR011009 -
Mtr8g2370 426 Gene3D Transferase(Phosphotransferase) domain 1 156 378 - -
Mtr8g2370 426 Pfam Protein tyrosine and serine/threonine kinase 82 353 IPR001245 GO:0004672|GO:0006468
Mtr8g2370 426 Gene3D Phosphorylase Kinase; domain 1 41 155 - -
Mtr8g2370 426 SMART serkin_6 77 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2370 426 ProSiteProfiles Protein kinase domain profile. 77 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2370 426 PANTHER OS01G0750732 PROTEIN 13 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2370 Mtr-Chr8 34142095 34144706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2370 13 362 Receptor kinase-like Gene Family AT1G51850 39.944 2.94e-74 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mtr8g2370 PK_Tyr_Ser-Thr 7.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2370 - - gmx:106794267 632.484