Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2369 ATGATGGAGTTTGAGACTAATCAATGCCATTTATTGGATTTATTTGATAATTTCATTGGGAGGGTCAAATGGGTTGGTAGTCTCGTCCTCTCAGTCATCATCCGAAACATCTTTATAGTGATCTTAACATTCTGCTTTGCATTTGTGGGAACTTTGTTGGGGGCTATGACTGGAGCTTTGATAGGCCAAAAAACAGAGAGTGGCTTCATTCGAGGTGCTGCGGTTGGTGCTATGTCAGGGGCTATTTTCTCTATTGAAGTCTTTGAATGTTCTATTGATCTTTGGCATTGTGATAATTCTGGAATAGGATGTCTTTTATACTTGATTGATATTATTGCTAGCCTAGTGAGTGGGAGACTTGTACGTGAAAGGATTGGTCAAGCCATGTTGAATGCGGTTCAAAGTCAGATGGGTGCAGGTGAAATGAACTTCTATGAGTTTCAAAATATATTTGACATTGGATGTGACACAGGCTTACCAGGAGCTTCGGTTGAAAAGATCCCAATAGTCTCAATCACAAGTGGCAATAGAGTTTCATGTTCAGTTTGTCTTGAGGATTTCCAAATTGGAGAAACGGTTAGGAGCTTGCCCCATTGTCATCATATGTTTCACATACCTTGCATTGACAAGTGGCTCATCAAGCATGGCTCGTGCCCATTATGCAGAAGATTTCTGTAA 678 0.4056 MMEFETNQCHLLDLFDNFIGRVKWVGSLVLSVIIRNIFIVILTFCFAFVGTLLGAMTGALIGQKTESGFIRGAAVGAMSGAIFSIEVFECSIDLWHCDNSGIGCLLYLIDIIASLVSGRLVRERIGQAMLNAVQSQMGAGEMNFYEFQNIFDIGCDTGLPGASVEKIPIVSITSGNRVSCSVCLEDFQIGETVRSLPHCHHMFHIPCIDKWLIKHGSCPLCRRFL* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2369 225 CDD RING-H2_PA-TM-RING 180 222 - -
Mtr8g2369 225 PANTHER RING/U-BOX SUPERFAMILY PROTEIN-RELATED 15 223 - -
Mtr8g2369 225 SMART ring_2 180 221 IPR001841 -
Mtr8g2369 225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 156 225 IPR013083 -
Mtr8g2369 225 ProSiteProfiles Zinc finger RING-type profile. 180 222 IPR001841 -
Mtr8g2369 225 SUPERFAMILY RING/U-box 172 224 - -
Mtr8g2369 225 Pfam Ring finger domain 179 222 IPR001841 -
Mtr8g2369 225 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 15 223 IPR044523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2369 Mtr-Chr8 34129312 34131448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2369 21 225 C3H Transcription Factor Family AT5G66070 68.599 7.78e-100 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2369 - - gmx:100816939 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0919 5 9103696 9105779 Mtr8g2369 8 34129312 34131448 PCT