Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2360 ATGAATTTTAATTCATCTAAGTATATATCCCATTTACCAGAATCACTTTTACCAAATGATGCATCACCAGAATGGAACAACAAAGCAGACAATGCATGGCAACTAACAGCAGCAACATTAGTAGGCCTTCAAACTGTTCCTGGGCTTGTAATACTCTATGGCAGCATGGTTAAGAAAAAATGGGCCGTAAATTCGGCTTTCATGGCCCTATATGCATTTGCTGCTGTACTAGTTTGTTGGGTTTTATGGGCCCATCATATGGCATTTGGTACCAAGCTTTTACCTTTTGTTGGAAAGCCAAACTTTGCCTTGAGTCAGAAGTTTCTACTTTCTAAGGCATCAACAAATTATTATTTACCAATGGCTGATTTTGTTTTCTATCAATTTGCTTTTGCTGCAATTACTCTTGTTTTGCTTGGAGGGTCTTTGCTTGGGAGAATGAATTTCTATGCATGGATGTTGTTTGTTCCTTTGTGGCTTACATTGTCTTATACTGTTGGTGCTTTTACTATATGGGGGAATGGCTTTCTCGAAGGGAAAATAATTGATTATGCCGGGGGGTTTGTAATTCATCTATCTTCTGGTGTTGCAGGTTTCACTGCTGCTTATTGGGTTGGTCCAAGAACTTCAAATGATAGACAAAATTTTCCACCAAATAACATAATTCACATGCTTGGAGGTGCAGGGTTCTTATGGATGGGTTGGACAGGTTTTAACGGAGGAGCGCCTTTTCAAGTGGGAGAGATTACATCCTTGGCTATATTCAATACTCATTTGTGCACTGCTACAAGCATACTTGTTTGGATTTCTCTAGATATGGCTGTATACAAGAAAGGCTCATTGATAGGTTCTGTCCAAGGAATGATGACTGGTCTCGTTTGCATCACACCGGGTGCAGGATTGGTGGATCCATGGGCAGCAATATTGATGGGAGCTTTGTCCGGTTCAATTCCATGGTACACGATGATGGTGTTGCACAAAAAATCACCATTCTTTCAAAGTGTAGATGATACATTAGGAGTCTTTCACACTCATGCTGTGGCTGGTATTCTTGGGGGAATCCTTTCTGGTGTGTTTGCCAAACCTAAACTTTTGAGGATTCTCTATGGTCCTTATGGGTCTGGCTTATTGTATAGTTATTTTGATGATAATATAGGTCAAGGAATCAAGCAAATGTGGTACCAATTATTAGGAGCAGTTTTTATTACTATTTGGAATGTTGTTATTACTAGTCTGATTTGTATTCTTTTAAATCGCTTTGTGAATCTTCGAATGCAAGAAGAAGACCTTGAGGTTGGTGATGATGCTGCTCATGGGGAAGAAGCTTATGTATTATGGGGTGATGGAGAAAGAATGCGGCTCCCTCTTCGTCGAGATATAAGTCCAATAATTCCTTACATTTCTCACCAAAGACATTCATTTCCTATCAATAAAATTGATGAGTAA 1446 0.3928 MNFNSSKYISHLPESLLPNDASPEWNNKADNAWQLTAATLVGLQTVPGLVILYGSMVKKKWAVNSAFMALYAFAAVLVCWVLWAHHMAFGTKLLPFVGKPNFALSQKFLLSKASTNYYLPMADFVFYQFAFAAITLVLLGGSLLGRMNFYAWMLFVPLWLTLSYTVGAFTIWGNGFLEGKIIDYAGGFVIHLSSGVAGFTAAYWVGPRTSNDRQNFPPNNIIHMLGGAGFLWMGWTGFNGGAPFQVGEITSLAIFNTHLCTATSILVWISLDMAVYKKGSLIGSVQGMMTGLVCITPGAGLVDPWAAILMGALSGSIPWYTMMVLHKKSPFFQSVDDTLGVFHTHAVAGILGGILSGVFAKPKLLRILYGPYGSGLLYSYFDDNIGQGIKQMWYQLLGAVFITIWNVVITSLICILLNRFVNLRMQEEDLEVGDDAAHGEEAYVLWGDGERMRLPLRRDISPIIPYISHQRHSFPINKIDE* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2360 481 TIGRFAM amt: ammonium transporter 30 443 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mtr8g2360 481 Gene3D Ammonium transporter AmtB like domains 13 446 IPR029020 -
Mtr8g2360 481 SUPERFAMILY Ammonium transporter 25 425 - -
Mtr8g2360 481 ProSitePatterns Ammonium transporters signature. 183 208 IPR018047 GO:0008519|GO:0016020|GO:0072488
Mtr8g2360 481 PANTHER AMMONIUM TRANSPORTER 9 472 - -
Mtr8g2360 481 PRINTS Rhesus blood group protein signature 128 144 IPR002229 GO:0005887
Mtr8g2360 481 PRINTS Rhesus blood group protein signature 222 240 IPR002229 GO:0005887
Mtr8g2360 481 PRINTS Rhesus blood group protein signature 253 275 IPR002229 GO:0005887
Mtr8g2360 481 PRINTS Rhesus blood group protein signature 346 362 IPR002229 GO:0005887
Mtr8g2360 481 Pfam Ammonium Transporter Family 32 443 IPR024041 GO:0008519|GO:0016020|GO:0072488
Mtr8g2360 481 PANTHER AMMONIUM TRANSPORTER MEP2 9 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2360 Mtr-Chr8 34073087 34075348 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2360 121 451 Inorganic Solute Cotransporters AT2G38290 59.459 6.25e-135 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2360 K03320 - gmx:100815876 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2694 4 40504620 40509710 Mtr8g2360 8 34073087 34075348 PCT