Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2359 ATGGGCGTATCCAAGAAATGGTTGGGAATCGTTCGAAGAAAATTCCTAAGATCATCCAACAAAGACATAACTCTCCATCCATGTATAAGTGTTTGCACAAATCAAAAGGAACAAGCCATACTTGGAAATGAATCAACCACCACCAGAGAAAATTTTATCATCTTGCCACCACCAGCTATTAATTCTTCATTGACCATATTCACCAAAGAAGACTTTGCAGCAATTAAGATTCAAGCTTATTTCAGGGGTCATCTAGCAAGAAGAGCACATAGGGCATTGAAAAGCCTTGTGAAATTGCAAGCATTGGTTCGCGGGGTGTGTGTGAGGAGACAATCGCGTATAGCAATGCAGTGTATGCACGCACTTGTTCGTTTACAAGTCAAGGTTCGTGCAAGGCAATTGCTCGGTAGCTTTGATCATAGTCGATAA 429 0.4126 MGVSKKWLGIVRRKFLRSSNKDITLHPCISVCTNQKEQAILGNESTTTRENFIILPPPAINSSLTIFTKEDFAAIKIQAYFRGHLARRAHRALKSLVKLQALVRGVCVRRQSRIAMQCMHALVRLQVKVRARQLLGSFDHSR* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2359 142 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 114 IPR027417 -
Mtr8g2359 142 Gene3D - 69 118 - -
Mtr8g2359 142 PANTHER OS04G0561100 PROTEIN 4 136 - -
Mtr8g2359 142 Pfam IQ calmodulin-binding motif 73 91 IPR000048 GO:0005515
Mtr8g2359 142 ProSiteProfiles IQ motif profile. 94 121 IPR000048 GO:0005515
Mtr8g2359 142 ProSiteProfiles IQ motif profile. 70 98 IPR000048 GO:0005515
Mtr8g2359 142 SMART iq_5 92 113 IPR000048 GO:0005515
Mtr8g2359 142 SMART iq_5 69 91 IPR000048 GO:0005515
Mtr8g2359 142 PANTHER IQ-DOMAIN 5-RELATED 4 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2359 Mtr-Chr8 34061405 34062471 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2359 1 136 IQD Protein Family AT3G51380 50.735 1.52e-35 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2359 - - cam:101507643 193.741