Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2327 ATGGTGAATACTTCTGAAGAGAACAATTCCAACGCAGTTATGCCAAGAAAATTTCAAGGAGGAATGAATCAAGTGGGTCGTGGTGGTGGAAGAATTGTTGGGCAGAACAGAAGAGCTTTGGGAGGGATCAATCAGAATTTTGTGCATGATCGACCTTACCCTTGTGTTGTACACAAGAGGGTGTTGTCTGAAAAACATGAGATTTGTGAAAAGAAACAGGCTGATCTGGGACATAGACCCATCACAAGGAGGTTTGCTGCACAAATTGCTGGCTCACAGCAATCCTATGCTGAGAAAACTAAGAATTCAAATCCATTGAATTCGAATGAGTTTGGAAACTCCATAGCCGTTGATGATGAACTCAAGTCACCAGAAGACCAACCAGAGCCTATGACTTTGGAGCATACTGAACCAATGCATAGTGATCCACTTGAGATGGAAGAGGTTGAGATGGAGGATATAGAGGGAGAGATGATTTTGGACATTGATAGCTGTGATGCAAACAATTCTCTTGCTGTTGTGGAGTATATTGAAGATCTCCATGCTTACTACAGAAAGATTGAGTATCTTGGCTGTGTTTCACCAGCCTACATGGATGAACAACTTGACCTCAATGAGAGGATGAGGGCTATATTAGTTGACTGGCTAATTGAGGTTCATGACAAATTCGACCTCATGCAAGAGACACTGTTTCTTACAGTTAATCTCATAGACAGATTCTTGGCTAAGCAGAATGTAGTAAGAAAGAAACTTCAGCTGGTTGGTCTTGTTGCCATGCTTTTGGCATGCAAGTATGAGGAAGTTTCTGTGCCTGTCGTTTCGGATCTGATCCATATCGCTGACAGAGCTTACACAAGGAAAGACATTCTCGAAATGGAGAAGTCGATGCTCAACACTCTGCAGTATAACATGTCTCTTCCAACTGCTTATGTTTTCATGAGAAGGTTTCTGAAGGCTGCTCAAGCTGACAAAAAACTTGAACTGGTGGCTTTTTTCTTGGTTGAGCTTTCTCTGGTGGAATATGAGATGCTGAAGTTTCCACCATCCTTGGTTGCTGCTGCTGCTGTCTACACAGCTCAATGCACTGTCAGTGGTTTCAAACACTGGAACAAGACATGCGAGTGGCACACCAACTACTCGGAAGATCAGCTGTTAGAGTGCTCTATGCTGATGGTTGGATTCCACCAGAAAGCCGGAGCCGGGAAACTGACAGGAGTACATAGGAAGTATGGCTCAGCAAAATTTAGCTTCACTGCTAAATGTGAACCAGCATGTTTTCTTCTGGAGAACAAGAACCAGCCATAG 1305 0.433 MVNTSEENNSNAVMPRKFQGGMNQVGRGGGRIVGQNRRALGGINQNFVHDRPYPCVVHKRVLSEKHEICEKKQADLGHRPITRRFAAQIAGSQQSYAEKTKNSNPLNSNEFGNSIAVDDELKSPEDQPEPMTLEHTEPMHSDPLEMEEVEMEDIEGEMILDIDSCDANNSLAVVEYIEDLHAYYRKIEYLGCVSPAYMDEQLDLNERMRAILVDWLIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKKLQLVGLVAMLLACKYEEVSVPVVSDLIHIADRAYTRKDILEMEKSMLNTLQYNMSLPTAYVFMRRFLKAAQADKKLELVAFFLVELSLVEYEMLKFPPSLVAAAAVYTAQCTVSGFKHWNKTCEWHTNYSEDQLLECSMLMVGFHQKAGAGKLTGVHRKYGSAKFSFTAKCEPACFLLENKNQP* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2327 434 MobiDBLite consensus disorder prediction 90 112 - -
Mtr8g2327 434 Gene3D - 193 305 - -
Mtr8g2327 434 Gene3D - 179 417 - -
Mtr8g2327 434 PANTHER CYCLINS 25 427 IPR039361 -
Mtr8g2327 434 CDD CYCLIN 305 392 IPR013763 -
Mtr8g2327 434 PIRSF Cyclin_A_B_D_E 2 433 IPR039361 -
Mtr8g2327 434 Pfam Cyclin, N-terminal domain 182 305 IPR006671 -
Mtr8g2327 434 SUPERFAMILY Cyclin-like 307 423 IPR036915 -
Mtr8g2327 434 CDD CYCLIN 208 297 IPR013763 -
Mtr8g2327 434 PANTHER CYCLIN-B2-1 25 427 - -
Mtr8g2327 434 MobiDBLite consensus disorder prediction 1 24 - -
Mtr8g2327 434 SMART cyclin_7 311 393 IPR013763 -
Mtr8g2327 434 SMART cyclin_7 214 298 IPR013763 -
Mtr8g2327 434 SUPERFAMILY Cyclin-like 168 304 IPR036915 -
Mtr8g2327 434 MobiDBLite consensus disorder prediction 1 17 - -
Mtr8g2327 434 Pfam Cyclin, C-terminal domain 307 422 IPR004367 -
Mtr8g2327 434 ProSitePatterns Cyclins signature. 209 240 IPR006671 -
Mtr8g2327 434 SMART Cyclin_C_2 307 424 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2327 Mtr-Chr8 33759837 33763288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2327 5 428 Core Cell Cycle Gene Families AT1G20610 56.512 9.68e-169 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2327 K21777 - gmx:100798068 617.461