Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2320 ATGGGTCTCTGTTTTTCCTTTCTGCGCCCCACCTCTGCACCTCCTCAATCTTCTTCCTTCAACAGACCTCTTTCTTCAGGTTCAACAAGCACTGTTGGATTCTCAGCAACTACAAGCAGTGCTGGAAGAAATTTGAAAGACCAAATTCTTGAAAGACCAAATTTGAAGGTTTTTGCTTTTATTGAACTGAAAGCTGCTACAAAAAGTTTCAAATCTGATACATTACTTGGTGAATATGGTTTTGGAAAAGTTTATAAAGGTTGGTTGGATGAGAAAACACTTTGTCCTTGTAAAGCAGGTTTTGGAATGGTTGTTGCTATCAAAAAATTTAACTATGAAAGTACTGAAGCATTTCAAGAATGGCAGTCAGAAGTTAACTTAGGAAGGCTCTCTCACCCAAACTTGGTGAAACTATTAGGTTACTGTTGGGATGAGGACGAGCTTCTTCTTGTGTATGAGTTCATACCGAATGGAAGTTTGGAGAATCATCTCTTCAGAAGAAATCCTAACAATATTGAACCACTTTCTTGGAACACAAGAATCAAAATTGCTATTGGTGCAGCTCGTGGTTTGTCATTCTTGCATGATTCAGAACAGCAAGCCATGTACAGAGATTTTAAGCCTTCAAATATACTCCTTGATGGGAGTTACAATGCAAAAATCTCAGATTTTGGATTAGATAAATTGGGGCCTTCTGGGGGACAATCACATGTAACTCCCAGGTTGATGGGCACATATGGTTATGCTGCTCCAGAATACATTGCAACAGGGCACTTGTATGTGAAGAGTGATGTGTATGGCTTTGGTGTGGTGCTGTTAGAAATCCTAACAGTTATGAGGGCATTGGACACAAAGAGGCCAACAGGACAACAAAACCTAGTTGAATGGGTGAAACCTTTTCTGTCCAATAAGAAAAAATTGAAAGGCATAATGGATGGTAGAATAGAAGGACAATACTCACCAAAGGCAGCAGTACAAGCAGCAGCACTTTCTCTAAAGTGCTTAGAAAATGACCCTAAACAACGTCCTTCTATGAAAGAAGTACTTGAGTCATTGGAAGTTATTGAAGCAATTCAGGTCAAAACCAAAAGATCCAACAATAATTCTCATCAACCTCCAGTTCTTCAAGCTGCTAGGCACTAG 1143 0.3946 MGLCFSFLRPTSAPPQSSSFNRPLSSGSTSTVGFSATTSSAGRNLKDQILERPNLKVFAFIELKAATKSFKSDTLLGEYGFGKVYKGWLDEKTLCPCKAGFGMVVAIKKFNYESTEAFQEWQSEVNLGRLSHPNLVKLLGYCWDEDELLLVYEFIPNGSLENHLFRRNPNNIEPLSWNTRIKIAIGAARGLSFLHDSEQQAMYRDFKPSNILLDGSYNAKISDFGLDKLGPSGGQSHVTPRLMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEILTVMRALDTKRPTGQQNLVEWVKPFLSNKKKLKGIMDGRIEGQYSPKAAVQAAALSLKCLENDPKQRPSMKEVLESLEVIEAIQVKTKRSNNNSHQPPVLQAARH* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2320 380 MobiDBLite consensus disorder prediction 9 31 - -
Mtr8g2320 380 Pfam Protein tyrosine and serine/threonine kinase 73 352 IPR001245 GO:0004672|GO:0006468
Mtr8g2320 380 Gene3D Transferase(Phosphotransferase) domain 1 155 376 - -
Mtr8g2320 380 CDD STKc_IRAK 76 353 - -
Mtr8g2320 380 SUPERFAMILY Protein kinase-like (PK-like) 49 355 IPR011009 -
Mtr8g2320 380 ProSiteProfiles Protein kinase domain profile. 70 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2320 380 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 23 368 - -
Mtr8g2320 380 MobiDBLite consensus disorder prediction 10 31 - -
Mtr8g2320 380 Gene3D Phosphorylase Kinase; domain 1 42 154 - -
Mtr8g2320 380 PANTHER OS01G0588500 PROTEIN-RELATED 23 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2320 Mtr-Chr8 33653745 33666096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2320 56 352 Glycoside Hydrolase AT3G07070 49.498 7.16e-95 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr8g2320 PK_Tyr_Ser-Thr 1.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2320 - - gmx:100794193 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2320 8 33653745 33666096 Mtr8g2320 8 33653745 33666096 ECH