Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2319 ATGCCTTCCTCCTCTGATCATCCATGGATATACGACGTGTTCATCAATTTCAGAGGAAAAGATACTCGCAACGATTTCGTTTCTCATCTCAATGCTGCACTCCAAAACCGTGGAATCAAGACTTTTCTTGATGATGAGAAACTTGGAAAGGGAGAAAAGCTGGGACCACAACTAGAGAAAGCAATTGAAGGGTCTCTGATATCTATTGTTGTTCTCTCACCGGACTATGCAGAATCTAGCTGGTGTCTTAACGAACTTGTACATATCTTGAAATGCCAAAAAACTTATGGCCAGGTGGTCATGCCAGTATTTTATCATGTTGACCCATCAGTTGTCCGTAAGCAGACGGGTGATTTTGGAAAAGCCTTGGAACTCACTGCTACAAAAAAAGAAGATAAATTGTTGTCCAACTGGAAAACCGCACTCAAACAAGTTGCAACTATAGCTGGCTGGGATTGCTACAATATCAGGAATAAAGGGGAACTAGCGAAGCAAATTGTTGAGGCCATTTTGAAAATACTAGATATCTCATTGTTGTCTATTACTAAATATCCGATTGGATTGGAATCCCGTGTGCAAAAAATTACCAAGTTTATTGATAATCAATCAAACAAAGTCTGCATGATAGGGATATGGGGAATGGGTGGATCCGGGAAAACAACCACAGCCAAAGCTATCTACAATAAAATCCATCGTAGGTTTGAAGGTAGAACAAGTTTCTTTGAAAGTATTCGAGAAGTTTGTGATAATAATTCTAGAGGGGTTATTCATTTACAACAACAACTTCTTTTAGATCTCCTGCAAATAAAACAAGAGATTCATAGCATTGCATTGGGGATGACTAAGATAGAGAAAAGACTTCGAGGACAAAAGGCTTTCATCGTACTCGATGATGTGACCACACCCGAGCAATTAAAAGCCCTGTGTGCAGATCCTAAGTTGTTCGGTTCGGGAAGTGTATTGATTATTACAACTAGAGATGCACGCCTTCTCAACTCACTTAGTGACGACCATATCTTCACAATGACGGAAATGGACAAATACCAGTCCCTTGAACTTTTCTGTTGGCATGCTTTTCAACAACCAAATCCTAGAGAAGGTTTTTGTGAACTCACTAAAAAAGTGGTTGCTTATTGCGGAGGATTACCATTGGCTCTTGAAGTCCTTGGAAGTTACTTATCAATGAGGAAAAAACTAGAATGGAAAAGTGCACTATCAAAATTAGAGAAAATTCCCAACAATCAAGTGCAACAGAAACTGAGAATCAGCTACGACGGCTTAGAAGATTATACTGAAAAGGATATATTTCTTGACATATGTTGTTTCTTCATTGGAAAGAACAGAGCTGATGTTACAGAGATACTTAATGGCTGTGGGCTTCATGCTGATATTGGAATAGTTGTCCTCATTGAGCGCAGCCTCATAAAAGTTGATAAAAATAACAAGCTTCAAATGCATGATTTGCTCAGAGACATGGGAAGAGCAATTGTTGGCGAAATTTCAGTCAAAGAGCCTGCAAAGCATAGCCGATTGTGGTTTCATGATGATGTGCTGGATGTTTTGTCAAAAAAAACCGGAACAGATACTATTGAGGGAATGATTTTGAAGTGCCAAAGAACAGGCAGGATTATATTTGGTACTAATTCTTTCCAGGAGATGCAAAAGCTGAGGCTTTTAAAACTTGATGGTGTTCACCTTATGGGAGATTATGGGTTAATTTCCAAACAACTAAGATGGGTTGATTGGCAACGATCTACCTTCAAATTTATACCGAATGACTTTGATCTGGAAAATCTAGTTGTTTTTGAATTAAAACATGGCAATGTTAGACAAGTTTGGCAGGAGACCAAGCTGTTAGACAAGCTGAAAATTCTCAATCTCAGTCATTCTAAGTACTTGAAAAGCACTCCTGACTTTGCAAAATTACCAAATCTAGAAAAGCTAATTATGAAGGATTGTCAAAGTTTGTCCGAGGTGCACACGTCCATTGGAGATCTCAAGAATCTTCTTTTGATAAATTTTAAGGACTGTACAAGTCTTGGCAATCTCCCAAAAGAGGTCTATAAAGTGAGATCAGTGAAAAGTCTCATTCTTTCTGGTTGTTCAATGATTGACAAATTGGAAGAAGATATATTGCAAATGGAATCCTTGACAACTTTAATTGCAGCAAATACTGGTATCAAACAAGTGCCCTATTCAATAGCAAGATCAAAAAGCATTGCATATATATCTCTATGTGGATATGAAGGATTATCATGTGACGTTTTTCCTTCTCTCATTTGGTCTTGGATGTCACCAACCATAAATTCCCTATCCCTTATTCATCCGTTTGCAGGCAATTCATTGTCTCTAGTTTCTTTGGATGTAGAGAGTAATAATATGGACTATCAATCACCGATGCTTACCGTCCTTTCAAAGCTTCGATGTGTTTGGGTTCAATGTCACTCAGAGAATCAACTTACTCAAGAATTAAGAAGATTTATTGATGATCTATATGATGTGAATTTTACTGAGTTGGAAACAACATCATATGGACACCAAATCACAAATATTTCCTTGAAATCAATTGGGATTGGAATGGGAAGTTCCCAAATAGTCTTGGATACTCTTGACAAGAGCTTAGCACAGGTTTCTTCTAAGTTGATTTATGAAGATTTTGATGGAGCTGTGTCTACAACCAAATTCGATAAGTTTCTCTTCTTCTCTAATTTAATTTTAGTTGTAACTGTTTGCTATTATTACTTGAGATGA 2751 0.3759 MPSSSDHPWIYDVFINFRGKDTRNDFVSHLNAALQNRGIKTFLDDEKLGKGEKLGPQLEKAIEGSLISIVVLSPDYAESSWCLNELVHILKCQKTYGQVVMPVFYHVDPSVVRKQTGDFGKALELTATKKEDKLLSNWKTALKQVATIAGWDCYNIRNKGELAKQIVEAILKILDISLLSITKYPIGLESRVQKITKFIDNQSNKVCMIGIWGMGGSGKTTTAKAIYNKIHRRFEGRTSFFESIREVCDNNSRGVIHLQQQLLLDLLQIKQEIHSIALGMTKIEKRLRGQKAFIVLDDVTTPEQLKALCADPKLFGSGSVLIITTRDARLLNSLSDDHIFTMTEMDKYQSLELFCWHAFQQPNPREGFCELTKKVVAYCGGLPLALEVLGSYLSMRKKLEWKSALSKLEKIPNNQVQQKLRISYDGLEDYTEKDIFLDICCFFIGKNRADVTEILNGCGLHADIGIVVLIERSLIKVDKNNKLQMHDLLRDMGRAIVGEISVKEPAKHSRLWFHDDVLDVLSKKTGTDTIEGMILKCQRTGRIIFGTNSFQEMQKLRLLKLDGVHLMGDYGLISKQLRWVDWQRSTFKFIPNDFDLENLVVFELKHGNVRQVWQETKLLDKLKILNLSHSKYLKSTPDFAKLPNLEKLIMKDCQSLSEVHTSIGDLKNLLLINFKDCTSLGNLPKEVYKVRSVKSLILSGCSMIDKLEEDILQMESLTTLIAANTGIKQVPYSIARSKSIAYISLCGYEGLSCDVFPSLIWSWMSPTINSLSLIHPFAGNSLSLVSLDVESNNMDYQSPMLTVLSKLRCVWVQCHSENQLTQELRRFIDDLYDVNFTELETTSYGHQITNISLKSIGIGMGSSQIVLDTLDKSLAQVSSKLIYEDFDGAVSTTKFDKFLFFSNLILVVTVCYYYLR* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2319 916 PRINTS Disease resistance protein signature 208 223 - -
Mtr8g2319 916 PRINTS Disease resistance protein signature 286 300 - -
Mtr8g2319 916 PRINTS Disease resistance protein signature 379 393 - -
Mtr8g2319 916 PRINTS Disease resistance protein signature 617 633 - -
Mtr8g2319 916 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 876 IPR044974 GO:0006952
Mtr8g2319 916 SUPERFAMILY L domain-like 484 822 - -
Mtr8g2319 916 Gene3D - 8 174 IPR035897 -
Mtr8g2319 916 ProSiteProfiles TIR domain profile. 9 170 IPR000157 GO:0007165
Mtr8g2319 916 SMART till_3 10 148 IPR000157 GO:0007165
Mtr8g2319 916 Gene3D Ribonuclease Inhibitor 529 871 IPR032675 -
Mtr8g2319 916 Pfam TIR domain 11 172 IPR000157 GO:0007165
Mtr8g2319 916 Gene3D - 175 340 IPR027417 -
Mtr8g2319 916 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 439 IPR027417 -
Mtr8g2319 916 Pfam NB-ARC domain 189 419 IPR002182 GO:0043531
Mtr8g2319 916 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 151 IPR035897 -
Mtr8g2319 916 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 14 876 - -
Mtr8g2319 916 Gene3D - 345 428 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2319 Mtr-Chr8 33638940 33651603 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2319 11 734 WRKY Transcription Factor Family AT4G12020 29.625 1.34e-71 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2319 - - cam:101511388 1102.81