Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2314 ATGGGTCTCTGTTTTTCCTTTCTGCGCCCCTCCTCTGCACCCCCTCAATCTTCTTCCTTCAACAGACCTCTTTCTTCAGGTTCAACAAGCACTGTTGGATTCTCAGCAACTACAAGCAGTGCTGGAAGAAGCCAATTCTCTGAGGTAGCAAGTGGAAGCATTGATGATACTACTGATGGGTCTCTTCCTTTTCCTTCACCAAATGGTCAAATTCTTGAAAGACCAAATTTGAAGGTTTTTAGTTTTATTGAATTGAAAGCTGCTACAAAAAGCTTCAAATCTGATACATTACTTGGTGAAGGTGGTTTTGGAAAAGTTTATAAAGGTTGGTTAGATGAGAAAACTCTTTCTCCTACTAAAGCTGGTTCTGGAATGGTTGTTGCTATCAAAAAATTGAACTCTGAAAGTACTCAAGGATTTCAAGAATGGCAGTCAGAAGTTAACTTTTTGGGAAGGCTCTCTCACCCAAACTTGGTGAAGCTATTAGGTTATTGTTGGGACGATGACGAGCTTCTTCTTGTGTACGAGTTCATGCCAAAAGGAAGTTTGGAGAATCATCTCTTCAGAAGAAATCCTAACATTGAACCACTTTCTTGGAACACAAGAATCAAAATAGCTATTGGTGCAGCTCGTGGTTTGGCTTTCTTGCATGATTCAGCAGATCAAGTTATATACAGAGATTTTAAGGCTTCAAATATACTCCTTGATGGGAGTTACATTGCAAAAATCTCAGATTTTGGATTAGCTAAATTGGGGCCTTCTGGGGGACAATCACATGTAACTACCAGGGTCATGGGCACATATGGTTATGCTGCTCCAGAATACATTGCAACAGGACACTTGTACGTGAAGAGTGATGTGTATGGCTTTGGTGTGGTGCTGTTAGAAATCCTAACAGCCATGAGGGCATTGGACACAAAGAGGCCAACAGGACAACAAAACCTAGTTGAATGGGTGAAACCTTTTCTGTCCAATAAGAAAAAATTGAAAGGCATAATGGATGGTAGAATAGAAGGACAATACTCACCAAAGGCAGCAGTACAAGCAGCAGCACTTTCTCTAAAGTGCTTAGAAAATGACCCTAAACAACGTCCTTCTATGAAAGAAGTACTTGAGTCATTGGAAGTTATTGAAGCAATTCAGGTCAAAACCAAAAGATCCAACAACAATTCTCATCAACCTCCAGTTCTTCAAGCTGCTAGGCACCAGAGAGTTGTGAAAGTATAA 1227 0.4042 MGLCFSFLRPSSAPPQSSSFNRPLSSGSTSTVGFSATTSSAGRSQFSEVASGSIDDTTDGSLPFPSPNGQILERPNLKVFSFIELKAATKSFKSDTLLGEGGFGKVYKGWLDEKTLSPTKAGSGMVVAIKKLNSESTQGFQEWQSEVNFLGRLSHPNLVKLLGYCWDDDELLLVYEFMPKGSLENHLFRRNPNIEPLSWNTRIKIAIGAARGLAFLHDSADQVIYRDFKASNILLDGSYIAKISDFGLAKLGPSGGQSHVTTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEILTAMRALDTKRPTGQQNLVEWVKPFLSNKKKLKGIMDGRIEGQYSPKAAVQAAALSLKCLENDPKQRPSMKEVLESLEVIEAIQVKTKRSNNNSHQPPVLQAARHQRVVKV* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2314 408 CDD STKc_IRAK 98 375 - -
Mtr8g2314 408 Pfam Protein tyrosine and serine/threonine kinase 95 374 IPR001245 GO:0004672|GO:0006468
Mtr8g2314 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Mtr8g2314 408 MobiDBLite consensus disorder prediction 9 69 - -
Mtr8g2314 408 Gene3D Phosphorylase Kinase; domain 1 66 177 - -
Mtr8g2314 408 SUPERFAMILY Protein kinase-like (PK-like) 69 377 IPR011009 -
Mtr8g2314 408 MobiDBLite consensus disorder prediction 10 65 - -
Mtr8g2314 408 ProSiteProfiles Protein kinase domain profile. 92 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2314 408 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 52 390 - -
Mtr8g2314 408 Gene3D Transferase(Phosphotransferase) domain 1 178 401 - -
Mtr8g2314 408 PANTHER OS01G0588500 PROTEIN-RELATED 52 390 - -
Mtr8g2314 408 ProSitePatterns Protein kinases ATP-binding region signature. 98 131 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2314 Mtr-Chr8 33605720 33610293 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2314 78 374 Glycoside Hydrolase AT3G07070 53.020 1.35e-105 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr8g2314 PK_Tyr_Ser-Thr 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2314 - - gmx:100794193 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0967 5 9598795 9601401 Mtr8g2314 8 33605720 33610293 PCT