Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2305 ATGTCTTGTTCTTCTTCATCTGGGTCTGAAGATGATGATGAAGGCTTTGATTCCTACCGGAAAGGTGGATATCACGCCGTCCGGGTCGGTGATCAGTTCGCCGGTGGAAGATATATAGCTCAGAGGAAATTGGGCTGGGGTCAGTTTTCCACCGTTTGGCTTGCTTTTGATACTACCAACGATACATATGTTGCTCTCAAAATCCAGAAAAGTGCAGCACAGTTTGTTCAGGCTGCTCTTCACGAGATAGATGTTCTTTCATCCATTGCTGATGGCGCCCCTTCAAATTCAAAATTTGTTGTCCAATTGATCGACCACTTTAAGCACACAGGTCCTAATGGCCAGCACCAATGCATGGTACTCGAGTTTCTTGGAGATAGCTTGCTACGTCTAGTCAGATACAACCGTTACAAAGGTCTTCCGATGAATAAAGTCAGGGAGATTTGTCAATGCATTTTGATTGGTTTGGATTACTTGCATAGGGAACATGGTATTATACACACAGACCTAAAACTTGAAAATGTTCTTTTGGTTTCTACTATCGATCCGGCGAAAGACCCTGTTAGATCGGGAGTCTCCCCGATTTTAGAGAGGCCCGAGGGAAACATAAACGGCGCGGTTACTAGTCTTATTGAGAAAAAGTTGAAAAGGAGAGCAAGGAGGGCGGTAGCTAAAATTTCTGGACAAAGAGGTTCTATGGGAGAAGCTCCAAATTCTGATAGAAATATTGATGGGATTGATGTTAGATGCAAAGTGGTTGATTTTGGAAATGCATGTTGGGCTGATAAGCCATTTGCGGAAGAAATTCAGACACGACAGTATAGAGCTCCTGAAGTTATACTGCAGGCTGGTTATTCCTTCTCCGTCGATATGTGGTCTTTTGCTTGTATTGCTTTCGAGCTTGCCACTGGGGATATGTTATTTACTCCCAAAGTCGGACAAGGTTTTAGCGAGGACGAGGATCACCTTGCCCTGATGATGGAACTCCTTGGAAAGATGCCCCGGAAGGTTGCTACTGCAGGAATGAAATCCAAGGATTTCTTCGACAGACACGGGGATCTCAAAAGGATTCGGAGGCTAAAATTTTGGCCTCTTAACAAACTATTGATTGAAAGATACAAATTATCAGAGAGTGATGCTCATGAATTTTCAGAGTTTCTCTTACCTCTTCTTGATTTTGCACCCGAGAAGCGACCAACTGCGGAACAGTGCCTGCAACACCCTTGGCTCATGGAAAAGGACTCTGTTCCTGATGAAATGAGAAATGAATCTAGTGTGGAAAAAGTGGATGTTGGAATAAGCAACCTTAAAATCAAGGTGGGAAAGTGA 1329 0.4364 MSCSSSSGSEDDDEGFDSYRKGGYHAVRVGDQFAGGRYIAQRKLGWGQFSTVWLAFDTTNDTYVALKIQKSAAQFVQAALHEIDVLSSIADGAPSNSKFVVQLIDHFKHTGPNGQHQCMVLEFLGDSLLRLVRYNRYKGLPMNKVREICQCILIGLDYLHREHGIIHTDLKLENVLLVSTIDPAKDPVRSGVSPILERPEGNINGAVTSLIEKKLKRRARRAVAKISGQRGSMGEAPNSDRNIDGIDVRCKVVDFGNACWADKPFAEEIQTRQYRAPEVILQAGYSFSVDMWSFACIAFELATGDMLFTPKVGQGFSEDEDHLALMMELLGKMPRKVATAGMKSKDFFDRHGDLKRIRRLKFWPLNKLLIERYKLSESDAHEFSEFLLPLLDFAPEKRPTAEQCLQHPWLMEKDSVPDEMRNESSVEKVDVGISNLKIKVGK* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2305 442 SUPERFAMILY Protein kinase-like (PK-like) 32 420 IPR011009 -
Mtr8g2305 442 CDD STKc_SRPK 27 410 - -
Mtr8g2305 442 SMART serkin_6 38 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2305 442 Pfam Protein kinase domain 249 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2305 442 Pfam Protein kinase domain 39 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2305 442 Gene3D Transferase(Phosphotransferase) domain 1 92 410 - -
Mtr8g2305 442 ProSiteProfiles Protein kinase domain profile. 38 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2305 442 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 7 419 - -
Mtr8g2305 442 PANTHER OS07G0472400 PROTEIN 7 419 - -
Mtr8g2305 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Mtr8g2305 442 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Mtr8g2305 442 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2305 Mtr-Chr8 33483384 33487304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2305 4 425 EF-hand Containing Proteins AT5G22840 49.684 6.47e-165 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Mtr8g2305 Pkinase 1.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2305 K08832 - gmx:100814976 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0984 5 9786716 9790660 Mtr8g2305 8 33483384 33487304 PCT